Publications for Clean Water Program

2024

Trinh M. 2021 Update to Cyanide Rolling Averages. Richmond, CA: San Francisco Estuary Institute; 2024. (552.88 KB)
Kleckner A, Davis J. Multi Year Plan 2024. Richmond, CA: San Francisco Estuary Institute; 2024. (3.3 MB)
Foley MM, Davis JA, Buzby N. Selenium Concentrations in Water and Clams in North San Francisco Bay, 2019-2020. Richmond, CA: San Francisco Estuary Institute; 2024. (970.15 KB)
Trinh M. 2021 Update to Copper Rolling Average. Richmond, CA: San Francisco Estuary Institute; 2024. (556.45 KB)

2023

Arnold WA, Carigan CC, Cortopassi G, et al. Quaternary Ammonium Compounds: A Chemical Class of Emerging Concern. Blum A, Branyan J, Bruton TA, eds. Environmental Science & Technology. 2023;57(20). doi:https://doi.org/10.1021/acs.est.2c08244. (3.53 MB)
Bǎlan SA, Andrews DQ, Blum A, et al. Optimizing Chemicals Management in the United States and Canada through the Essential-Use Approach. Environmental Science & Technology. 2023;57(4). doi:https://doi.org/10.1021/acs.est.2c05932. (2.72 MB)
Kleckner A, Sutton R, Yee D, Wong A, Davis J, Salop P. 2023 RMP Sediment Cruise Sampling and Analysis Plan. Richmond, CA: San Francisco Estuary Institute; 2023. (445.99 KB)
Foley M, Davis J, Yee D. Multi-Year Plan 2023. Richmond, California: San Francisco Estuary Institute; 2023. (3.61 MB)
Yee D, Wong A. Re-evaluation of the Floating Percentile Method for Deriving Dredged Sediment Screening Guidelines. Richmond, California: San Francisco Estuary Institute; 2023. (3.4 MB)
Gilbreath AN, Stark K, Pearce S, Mckee L. Suspended Sediment Loads Analysis of Four Creeks in the San Francisco Bay Area. Richmond, CA.: San Francisco Estuary Institute; 2023. (4.92 MB) (7.33 MB) (5.1 MB) (7.5 MB) (7.67 MB)
Davis J. 2023 RMP Update. Richmond, CA: San Francisco Estuary Institute; 2023. (37.75 MB)
2023 Status and Trends Monitoring - Sampling Plans and QA Reports.; 2023. (3.21 MB) (13.36 MB) (445.99 KB) (406.78 KB)
Mendez M, Kleckner A, Sutton R, et al. 2023 Bay Prey Fish and Near-field / Margins Sediment Sampling and Analysis Plan. Richmond, CA: San Francisco Estuary Institute; 2023. (406.78 KB)
Kleckner A, Sutton R, Yee D, Gilbreath A, Trinh M. Water Year 2023 RMP Near-Field Water Sampling and Analysis Plan. Richmond, CA: San Francisco Estuary Institute; 2023. (13.36 MB)
Kleckner A, Sutton R, Yee D, Wong A, Davis J, Salop P. 2023 RMP Dry Season Water Cruise Plan. Richmond, CA: San Francisco Estuary Institute; 2023. (3.21 MB)
SFEI. Nature-based Solutions for Nutrient Removal.; 2023. (35.93 MB) (24.13 MB) (45.19 MB) (24.22 MB) (913.05 KB)
McKee L, Peterson D, Braud A, et al. San Francisco Bay Sediment Modeling and Monitoring Workplan. Richmond, CA: San Francisco Estuary Institute; 2023. (478.36 KB)
McKnight K, Braud A, Dusterhoff S, et al. Conceptual Understanding of Fine Sediment Transport in San Francisco Bay. Richmond, CA: San Francisco Estuary Institute; 2023. (46.2 MB)
Fregoso TA, Foxgrover AC, Jaffe BE. Sediment Deposition, Erosion, and Bathymetric Change in San Francisco Bay, California, 1971–1990 and 1999–2020. Santa Cruz, CA: United State Geological Survey; 2023. doi:https://doi.org/10.3133/ofr20231031. (8 MB)
Fregoso TA, Jaffe BE, Foxgrover AC. Bathymetric change analysis in San Francisco Bay, California, from 1971 to 2020. United States Geological Survey; 2023. doi:https://doi.org/10.5066/P9Y5PEV0.
Thorne KM, Bristow ML. Sediment Deposition and Accretion Data from a Tidal Salt Marsh in South San Francisco Bay, California 2021-2022. U.S. Geological Survey Western Ecological Research Center ; 2023. doi:doi:10.5066/P9YBBXIZ.
Fregoso TA, Foxgrover AC, Jaffe BE. Sediment deposition, erosion, and bathymetric change in San Francisco Bay, California, 1971–1990 and 1999–2020. Santa Cruz, CA: United States Geological Survey Pacific Coastal and Marine Science Center; 2023. doi:10.3133/ofr20231031.
Fregoso TA, Jaffe BE, Foxgrover AC. Bathymetric change analysis in San Francisco Bay, California, from 1971 to 2020. Santa Cruz, CA: United States Geological Survey Pacific Coastal and Marine Science Center; 2023. doi:10.5066/P9Y5PEV0.
North Bay Selenium 2019-20 QA Summaries. Richmond, CA: San Francisco Estuary Institute; 2023. (108.07 KB)

2022

Hampton LMThornto, Bouwmeester H, Brander SM, et al. Research recommendations to better understand the potential health impacts of microplastics to humans and aquatic ecosystems. Microplastics and Nanoplastics. 2022;2(18). doi:https://doi.org/10.1186/s43591-022-00038-y. (466.11 KB)
Mehinto AC, Wagner M, Hampton LMThornto, et al. Risk-based management framework for microplastics in aquatic ecosystems. Coffin S, Koelmans AA, Brander SM, eds. Microplastics and Nanoplastics. 2022;2(17). doi:https://doi.org/10.1186/s43591-022-00033-3. (1.3 MB)
Wang M, Kinyua J, Jiang T, et al. Suspect Screening and Chemical Profile Analysis of Storm-Water Runoff Following 2017 Wildfires in Northern California. Environmental Toxicology and Chemistry. 2022. doi:https://doi.org/10.1002/etc.5357.
Hampton LMThornto, De Frond H, Hermabessiere L, et al. A living tool for the continued exploration of microplastic toxicity. Lowman H, Coffin S, Darin E, eds. Microplastics and Nanoplastics. 2022;2(13). doi:https://doi.org/10.1186/s43591-022-00032-4. (2.16 MB)
2022 Pulse Resources. 2022. (8.17 MB) (541.71 KB) (347.88 KB)
Applied Marine Sciences. 2021 RMP Water Cruise Report. Livermore, CA: Applied Marine Sciences; 2022. (1.52 MB)
Foley M. 2023 Detailed Workplan and Budget. Richmond, California: San Francisco Estuary Institute; 2022. (800.9 KB)
Zi T, Braud A, McKee LJ, Foley M. San Francisco Bay Watershed Dynamic Model (WDM) Progress Report, Phase 2. Richmond, California: San Francisco Estuary Institute; 2022. (3.56 MB)
Mendez M, Trinh M, Miller E, Lin D, Sutton R. PFAS in San Francisco Bay Water. Richmond, CA: San Francisco Estuary Institute; 2022. (2.37 MB)
Davis J, Foley M, Askevold RA, Sutton R, Senn D, Plane E. 2022 Pulse of the Bay. Richmond, California: San Francisco Estuary Institute; 2022. (5.57 MB) (63.26 MB)
Foley MM, Davis JA. Charter: Regional Monitoring Program for Water Quality in San Francisco Bay. Richmond, CA: San Francisco Estuary Institute; 2022. (890.58 KB)
Foley MM. 2022 RMP Multi-Year Plan. Richmond, California: San Francisco Estuary Institute; 2022. (4.32 MB)

2021

Foley M, Sutton R, Yee D, Salop P. 2021 RMP Water Cruise Plan. Richmond, California: San Francisco Estuary Institute; 2021. (1.52 MB)
2020 Bay Margins Sediment Study Cruise Plan. Richmond, California: San Francisco Estuary Institute; 2021. (1 MB)
2020-21 RMP North Bay Selenium Study. Richmond, CA: San Francisco Estuary Institute; 2021. (7.65 MB)
Yee D. 2019 RMP Data Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute; 2021. (426.68 KB)
Zi T, Mckee L, Yee D, Foley M. San Francisco Bay Regional Watershed Modeling Progress Report, Phase 1. Richmond, CA: San Francisco Estuary Institute; 2021. (8.84 MB)
Zi T, Kauhanen P, Whipple A, Mckee L. Green Stormwater Infrastructure Planning-level Analysis for Livermore-Amador Valley. Richmond, Calif.: San Francisco Estuary Institute; 2021. (20.75 MB) (12.19 MB)
Ellisor D, Buzby N, Weaver M, Foley M, Pugh R. The San Francisco Estuary Institute Collection at the NIST Biorepository. Gaithersburg, MD: National Institute of Standards and Technology; 2021. doi:https://doi.org/10.6028/NIST.IR.8370. (1.28 MB)
Foley M, Davis J, Yee D. 2021 RMP Detailed Workplan and Budget. Richmond, CA: San Francisco Estuary Institute; 2021. (552.87 KB)
Buzby N, Davis JA, Sutton R, et al. Contaminant Concentrations in Sport Fish from San Francisco Bay: 2019. Richmond, CA: San Francisco Estuary Institute; 2021. (5.15 MB)
San Francisco Bay North Bay Margins Sediment Report. Moss Landing, California: Marine Pollution Studies Lab; 2021. (1.2 MB)
Moran K, Miller E, Mendez M, et al. A Synthesis of Microplastic Sources and Pathways to Urban Runoff. Richmond, CA: San Francisco Estuary Institute; 2021. (9.17 MB)
Foley M. 2021 RMP Multi-Year Plan. Richmond, CA: San Francisco Estuary Institute; 2021. (3.5 MB)

2020

Franz A, Salop P. 2019 Bay RMP Water Cruise Plan. Richmond, CA: San Francisco Estuary Institute; 2020. (2.86 MB)
Mckee L, Lowe J, Dusterhoff S, Foley M, Shaw S. Sediment Monitoring and Modeling Strategy. Richmond, CA: San Francisco Estuary Institute; 2020. (779.08 KB)
McKnight K, Lowe J, Plane E. Special Study on Bulk Density. Richmond, CA: San Francisco Estuary Institute; 2020:43. (4.06 MB)
2019-20 RMP North Bay Selenium Study. Richmond, CA: San Francisco Estuary Institute; 2020. (4.22 MB)
Buzby N, Yee D, Salop P, Foley M. 2019 RMP North Bay Selenium Monitoring Sampling and Analysis Plan. Richmond, CA: San Francisco Estuary Institute; 2020. (2.08 MB)
2020 Bay RMP Detailed Workplan and Budget. Richmond, CA: San Francisco Estuary Institute; 2020. (359.38 KB)
Buzby N, Yee D, Foley M, David J, Sigala M, Bonnema A. 2019 Sport Fish Monitoring Sampling and Analysis Plan. Richmond, CA: San Francisco Estuary Institute; 2020. (628 KB)
Davis J, Foley M, Askevold R, et al. RMP Update 2020.; 2020. (44.92 MB)
Buzby N, Lin D, Sutton R. Neonicotinoids and Their Degradates in San Francisco Bay Water. Richmond, CA: San Francisco Estuary Institute; 2020. (1.8 MB)

2019

Sutton R, Xie Y, Moran KD, Teerlink J. Occurrence and Sources of Pesticides to Urban Wastewater and the Environment. In: Pesticides in Surface Water: Monitoring, Modeling, Risk Assessment, and Management. Pesticides in Surface Water: Monitoring, Modeling, Risk Assessment, and Management. Washington, DC: American Chemical Society; 2019:63-88. doi:10.1021/bk-2019-1308.ch005.
Gilbreath A, McKee L, Shimabuku I, et al. Multi-year water quality performance and mass accumulation of PCBs, mercury, methylmercury, copper and microplastics in a bioretention rain garden. Journal of Sustainable Water in the Built Environment. 2019;5(4). doi:https://ascelibrary.org/doi/abs/10.1061/JSWBAY.0000883. (627.7 KB) (4.92 MB)
Wu J, Kauhanen P, Hunt JA, Senn D, Hale T, McKee LJ . Optimal Selection and Placement of Green Infrastructure in Urban Watersheds for PCB Control. Journal of Sustainable Water in the Built Environment. 2019;5(2). doi:10.1061/JSWBAY.0000876.
Yee D. 2018 RMP Sediment Data Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute; 2019. (240.45 KB)
Yee D. 2018 RMP Tissue Data Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute; 2019. (247.2 KB)
Foley M. 2020 RMP Multi-Year Plan. Richmond, CA: San Francisco Estuary Institute; 2019. (3.04 MB)
Foley M, Davis J, Yee D. 2019 RMP Annual Workplan and Budget. Richmond, CA: San Francisco Estuary Institute; 2019. (784.46 KB)
Sedlak M, Sutton R, Miller L, Lin D. Microplastic Strategy Update. Richmond, CA: San Francisco Estuary Institute; 2019. (1.9 MB)
Sutton R, Lin D, Sedlak M, et al. Understanding Microplastic Levels, Pathways, and Transport in the San Francisco Bay Region. Richmond, CA: San Francisco Estuary Institute; 2019. (4.95 MB) (66.14 MB)
Foley M. 2019 Bay RMP Multi-Year Plan. Richmond, CA: San Francisco Estuary Institute; 2019. (3.16 MB)
Yee D, Wong A, Buzby N. Characterization of Sediment Contamination in South Bay Margin Areas. Richmond, CA: San Francisco Estuary Institute; 2019. (6.05 MB)
Wu J, McKee L. Regional Watershed Modeling and Trends Implementation Plan. Richmond, CA: San Francisco Estuary Institute; 2019. (2.25 MB)
Salop P, Herrmann C. 2019 RMP Water Cruise Report. Livermore, CA: Applied Marine Sciences; 2019. (321.45 KB)
SFEI. The Pulse of the Bay 2019: Pollutant Pathways. Richmond, CA: San Francisco Estuary Institute; 2019. (21.42 MB)
Sigala M. 2019 RMP Contaminant Concentrations in San Francisco Bay Sportfish Cruise Report. Moss Landing, CA: Marine Pollution Studies Laboratory, Moss Landing Marine Laboratories; 2019. (12.28 MB)
Yee D, Davis J, Buzby N. 2019 Selenium Intercomparison and Laboratory Selection Memorandum. Richmond, CA: San Francisco Estuary Institute; 2019. (68.46 KB)

2018

Wu J, Kauhanen P, Hunt J, McKee L. Green Infrastructure Planning for the City of Sunnyvale with GreenPlan-IT. Richmond, CA: San Francisco Estuary Institute ; 2018. (2.21 MB)
Shimabuku I, Trowbridge P, Salop P, Franz A. 2018 RMP Bivalve Retrieval Cruise Plan. Richmond, CA: San Francisco Estuary Institute ; 2018. (466.59 KB)
Nuss E, Zhang Z, Holleman R, et al. Hydrodynamic and Water Quality Model Calibration and Application in San Francisco Bay. Richmond, CA: San Francisco Estuary Institute ; 2018. (32.2 MB)
Grieb T, Roy S, Rath J, Stewart R, Sun J, Davis JA. North Bay Selenium Monitoring Design. Richmond, CA: San Francisco Estuary Institute ; 2018. (2.08 MB)
Kauhanen P, Wu J, Hunt J, McKee L. Green Plan-IT Application Report for the East Bay Corridors Initiative. Richmond, CA: San Francisco Estuary Institute; 2018. (1.26 MB)
Sun J, Davis J, Stewart R. Selenium in Muscle Plugs of White Sturgeon from North San Francisco Bay, 2015-2017. Richmond, CA: San Francisco Estuary Institute ; 2018. (2.24 MB)
Trowbridge P. Status & Trends Monitoring Design: 2018 Update. Richmond, CA: San Francisco Estuary Institute ; 2018. (1.13 MB)
Yee D. 2017 RMP Water Samples Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute; 2018. (212.28 KB)
Trowbridge P. 2018 Bay RMP Multi-Year Plan. Richmond, CA: San Francisco Estuary Institute ; 2018. (3.88 MB)
Lin D, Sutton R, Sun J, Ross J. Screening of Pharmaceuticals in San Francisco Bay Wastewater. Richmond, CA: San Francisco Estuary Institute ; 2018. (1.06 MB)
Wu J, Kauhanen P, Hunt J, McKee L. Green Infrastructure Planning for the City of Richmond with GreenPlan-IT. Richmond, CA: San Francisco Estuary Institute; 2018. (1.82 MB)
Davis J. 2018 Regional Monitoring Program Update. Richmond, CA: San Francisco Estuary Institute ; 2018. (30.3 MB)
Salop P, Shimabuku I, Davis J, Franz A. 2018 Bivalve Retrieval Cruise Report. Richmond, CA: San Francisco Estuary Institute ; 2018. (738.95 KB)
Schoellhamer D, McKee L, Pearce S, et al. Sediment Supply to San Francisco Bay. Richmond, CA: San Francisco Estuary Institute ; 2018. (1.74 MB)
Wu J, Kauhanen P, Hunt J, McKee L. Green Infrastructure Planning for the City of Oakland with GreenPlan-IT. Richmond, CA: San Francisco Estuary Institute ; 2018. (1.98 MB)
Yee D, Wong A, Hetzel F. Current Knowledge and Data Needs for Dioxins in San Francisco Bay. Richmond, CA: San Francisco Estuary Institute ; 2018. (3.06 MB)
Gilbreath A, Pearce S, Shimabuku I, McKee L. Bay Area Green Infrastructure Water Quality Synthesis. Richmond, CA: San Francisco Estuary Institute ; 2018. (2.31 MB) (1.95 MB)
Yee D. 2017 RMP Bay Margins Sediment Samples Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute; 2018. (210.1 KB)
Salop P. 2018 RMP Bivalve Deployment Cruise Report. Richmond, CA: San Francisco Estuary Institute ; 2018. (846.17 KB)
Shimabuku I, Pearce S, Trowbridge P, Franz A, Yee D, Salop P. Field Operations Manual for the Regional Monitoring Program. Richmond, CA: San Francisco Estuary Institute; 2018. (1.43 MB)
Trowbridge P, Wong A, Davis J, Ackerman J. 2018 RMP Bird Egg Monitoring Sampling and Analysis Plan. Richmond, CA: San Francisco Estuary Institute; 2018. (882.63 KB)
Shimabuku I, Trowbridge P, Salop P. 2018 RMP Bivalve Deployment Cruise Plan. Richmond, CA: San Francisco Estuary Institute; 2018. (268.38 KB)
Franz A, Trowbridge P, Salop P. 2018 RMP Sediment Sampling and Analysis Plan. Richmond, CA: San Francisco Estuary Institute; 2018. (1.7 MB)
Denslow N, Kroll K, Mehinto A, Maruya K. Estrogen Receptor In Vitro Assay Linkage Studies. Richmond, CA: San Francisco Estuary Institute ; 2018. (1.8 MB)
Lin D, Sutton R. Alternative Flame Retardants in San Francisco Bay: Synthesis and Strategy. Richmond, CA: San Francisco Estuary Institute ; 2018. (298.68 KB)
Salop P, Franz A. 2018 RMP Sediment Cruise Report. Richmond, CA: San Francisco Estuary Institute ; 2018. (1014.5 KB)
Shimabuku I, Trowbridge P, Sun J. Bay 2017 Bay RMP Field Sampling Report. Richmond, CA: San Francisco Estuary Institute ; 2018. (7.01 MB)
Shimabuku I, Trowbridge P, Salop P. 2018 RMP Bivalve Retrieval Cruise Plan. Richmond, CA: San Francisco Estuary Institute; 2018. (466.59 KB)

2017

McKee LJ, Bonnema A, David N, et al. Long-term variation in concentrations and mass loads in a semi-arid watershed influenced by historic mercury mining and urban pollutant sources. Science of The Total Environment. 2017;605-606:482-497. doi:https://doi.org/10.1016/j.scitotenv.2017.04.203.
Wu Y, Tan H, Sutton R, Chen D. From Sediment to Top Predators: Broad Exposure of Polyhalogenated Carbazoles in San Francisco Bay (U.S.A.). Environmental Science and Technology. 2017;51:2038-2046. doi:10.1021/acs.est.6b05733.
Wu J, Gilbreath A, McKee LJ. Regional Watershed Spreadsheet Model (RWSM): Year 6 Progress Report. Richmond, CA: San Francisco Estuary Institute; 2017. (1.79 MB)
RMP. 2017 RMP Detailed Workplan and Budget. Richmond, CA: San Francisco Estuary Institute; 2017. (2.27 MB)
Davis J, Yee D, Fairey R, Sigala M. San Leandro Bay PCB Study Data Report. Richmond, CA: San Francisco Estuary Institute; 2017. (3.39 MB)
Holleman R, Nuss E, Senn D. San Francisco Bay Interim Model Validation Report. Richmond, CA: San Francisco Estuary Institute; 2017. (34.98 MB)
RMP. 2017 RMP Multi-Year Plan. Richmond, CA: San Francisco Estuary Institute; 2017. (2.14 MB)
Trowbridge P, Sun J, Franz A, Yee D. 2017 Margins Sediment Cruise Plan. Richmond, CA: San Francisco Estuary Institute ; 2017. (919.33 KB)
SFEI. The Pulse of the Bay: The 25th Anniversary of the RMP. Richmond, CA: San Francisco Estuary Institute; 2017. (15.72 MB)
Yee D. 2016 RMP Bird Egg Samples Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute; 2017. (332.09 KB)
Yee D. 2016 RMP Bivalve Samples Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute ; 2017. (284.38 KB)
Fairey R, Sigala M. 2017 Margins Microplastics Cruise Report. Moss Landing, CA: Coastal Conservancy & Research; 2017. (1.95 MB)
Lin D, Sun J, Yee D, Franz A, Trowbridge P, Salop P. 2017 RMP Water Cruise Plan. Richmond, CA: San Francisco Estuary Institute ; 2017. (3.63 MB)
Sun J, Pearce S, Trowbridge P. RMP Field Sampling Report 2016. Richmond, CA: San Francisco Estuary Institute; 2017. (1.08 MB)
Salop P. 2017 RMP Water Cruise Report. Livermore, CA: Applied Marine Sciences; 2017. (1.16 MB)
Trowbridge P. 2018 RMP Detailed Workplan and Budget. Richmond, CA: San Francisco Estuary Institute ; 2017. (390.05 KB)
Trowbridge P. Charter: Regional Monitoring Program for Water Quality in San Francisco Bay. Richmond, CA: San Francisco Estuary Institute ; 2017. (1.68 MB)
Sutton R, Sedlak M. Microplastic Monitoring and Science Strategy for San Francisco Bay. Richmond, Calif.: San Francisco Estuary Institute; 2017. (17.38 MB)
Holleman R, MacVean L, Mckibben M, Sylvester Z, Wren I, Senn D. Nutrient Management Strategy Science Program. Richmond, CA: San Francisco Estuary Institute; 2017. (49.7 MB)
Yee D, Wong A, Shimabuku I, Trowbridge P. Characterization of Sediment Contamination in Central Bay Margin Areas. Richmond, CA: San Francisco Estuary Institute; 2017. (2.89 MB)

2016

Sutton R, Mason SA, Stanek SK, Willis-Norton E, Wren IF, Box C. Microplastic contamination in the San Francisco Bay, California, USA. Marine Pollution Bulletin. 2016;109. doi:10.1016/j.marpolbul.2016.05.077.
Mason SA, Garneau D, Sutton R, et al. Microplastic pollution is widely detected in US municipal wastewater treatment plant effluent. Environmental Pollution. 2016;218:1045-1054. doi:10.1016/j.envpol.2016.08.056.
Senn D, Trowbridge P. San Francisco Bay Nutrient Management Strategy Observation Program. Richmond, CA: San Francisco Estuary Institute; 2016. (565.59 KB)
Senn D, Novick E. Nutrient Management Strategy Science Plan Report. Richmond, CA: San Francisco Estuary Institute; 2016. (9.78 MB)
RMP. 2016 RMP Multi-Year Plan. Richmond, CA: San Francisco Estuary Institute; 2016. (5.57 MB)
San Francisco Estuary Institute (SFEI). 2016 Regional Monitoring Program Update. Richmond, CA: San Francisco Estuary Institute; 2016. (6.27 MB)
SFEI. 2015 Annual Monitoring Report. Richmond, CA: San Francisco Estuary Institute; 2016. (3.28 MB)
Jabusch T, Bresnahan P, Trowbridge P, et al. Summary and Evaluation of Delta Subregions for Nutrient Monitoring and Assessment.; 2016. (3.74 MB) (5.45 MB) (16.05 MB) (3.03 MB) (523.1 KB)
Hunt J, Trowbridge P, Yee D, Franz A, Davis J. Sampling and Analysis Plan for 2016 RMP Status and Trends Bird Egg Monitoring. Richmond, CA: San Francisco Estuary Institute; 2016:31 pp. (298.16 KB)
SFEI. 2016 RMP Sturgeon Derby Study Sampling & Analysis Plan. Richmond, CA: San Francisco Estuary Institute ; 2016. (250.62 KB)
RMP. 2016 RMP Detailed Workplan and Budget. Richmond, CA: San Francisco Estuary Institue; 2016. (1.73 MB)

2015

David N, Gluchowski DC, Leatherbarrow JE, Yee D, McKee LJ . Estimation of Contaminant Loads from the Sacramento-San Joaquin River Delta to San Francisco Bay. Water Environment Research. 2015;87(4):334-346. doi:http://dx.doi.org/10.2175/106143015X14212658613721.
Sutton R, Sedlak M, Yee D, et al. Declines in Polybrominated Diphenyl Ether Contamination of San Francisco Bay following Production Phase-Outs and Bans. Environmental Science and Technology. 2015;49(2):777-784. doi:10.1021/es503727b.
RMP Lead Scientist. 2015 RMP Artesian Slough Sampling & Analysis Plan. Richmond, CA: San Francisco Estuary Institute; 2015. (250.05 KB)
SFEI. 2015 Sturgeon Muscle Plug Study Sampling & Analysis Plan. Richmond, CA: San Francisco Estuary Institute ; 2015. (189.22 KB)
San Francisco Estuary Institute. 2013-2014 Annual Monitoring Results. Richmond, CA: San Francisco Estuary Institute; 2015. (2.86 MB)
SFEI. 2015 Pulse of the Bay: The State of Bay Water Quality - 2015 and 2065. Richmond, CA: San Francisco Estuary Institute; 2015. (9.54 MB)
Trowbridge P, Davis JA, Wilson R. Charter: Regional Monitoring Program for Water Quality in San Francisco Bay. Richmond, Calif: San Francisco Estuary Institute; 2015. (554.31 KB)
2015 RMP Program Plan. Richmond, CA: San Francisco Estuary Institute; 2015. (414.17 KB)
2015 RMP Multi-Year Plan. Richmond, CA: San Francisco Estuary Institute; 2015. (2.22 MB)
2015 RMP Detailed Workplan. Richmond, CA: San Francisco Estuary Institute; 2015. (546.26 KB)
Anderson B, Phillips B, Voorhees J. The Effects of Kaolin Clay on the Amphipod Eohaustorius estuarius. Davis, CA: Department of Environmental Toxicology, University of California, Davis; 2015. (1.17 MB)
Sutton R, Kucklick J. A Broad Scan of Bay Contaminants. Richmond, CA: San Francisco Estuary Institute; 2015. (1.34 MB)
Yee D. 2014 RMP Bivalve Samples Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute; 2015. (444.44 KB)
Applied Marine Sciences. 2015 RMP Water Cruise Report. Livermore, CA: Applied Marine Sciences; 2015. (233.29 KB)
Yee D. 2013 RMP Water Samples Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute; 2015. (493.04 KB)
Yee D. 2014 RMP Sediment Samples Quality Assurance Report. Richmond, CA: San Francisco Estuary Institute; 2015. (467.89 KB)
Novick E, Holleman R, Jabusch T, et al. Characterizing and quantifying nutrient sources, sinks and transformations in the Delta: synthesis, modeling, and recommendations for monitoring. Richmond, CA: San Francisco Estuary Institute; 2015. (2.39 MB) (101.95 KB) (2.58 MB) (1.52 MB) (115.37 KB) (8.97 MB) (36.31 MB)
Applied Marine Sciences. 2015 RMP Water Cruise Plan. Livermore, CA: Applied Marine Sciences; 2015. (770.62 KB)

2014

Applied Marine Sciences. 2013 RMP Water Cruise Plan. Livermore, CA: Applied Marine Sciences; 2014. (996.06 KB)
Lowe S, Robinson A, Frontiera P, Cayce K, Collins JN. Creating Landscape Profiles of Aquatic Resource Abundance, Diversity and Condition. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2014:21. (651.67 KB)
Collins JN, Lowe S, Pearce S, Roberts C. Santa Rosa Plain Wetlands Profile: A Demonstration of the CaliforniaWetland and Riparian Area Monitoring Plan. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2014:46. (3.03 MB)
Davis JA. 2014 Regional Monitoring Program Update. Richmond, CA: San Francisco Estuary Institute; 2014. Available at: http://ebooks.sfei.org/update2014/. (14.23 MB)
Novick E, Wu J, Gilbreath AN, Senn DB. Nutrient Stormwater Monitoring Results: WY2012 and WY2013. Richmond, CA: San Francisco Estuary Institute; 2014. (2.27 MB)
Novick E, Senn DB. External Nutrient Loads to San Francisco Bay. Richmond, CA: San Francisco Estuary Institute; 2014:98. (8.07 MB)
Regional Monitoring Program for Water Quality in the SF Estuary. 2012 Annual Monitoring Results. Richmond, CA: San Francisco Estuary Institute; 2014. (7.38 MB)
Beller EE, Baumgarten S, Grossinger RM, et al. Northern San Diego County Lagoons Historical Ecology Investigation. Richmond, CA: San Francisco Estuary Institute - Aquatic Science Center; 2014:215. Available at: http://www.sfei.org/HE_San_Diego_Lagoons. (305.02 MB) (50.9 MB)
Jayasinghe S, Kroll K, Adeyemo O, et al. Linkage of In Vitro Assay Results With In Vivo End Points. Richmond, CA: San Francisco Estuary Institute; 2014. (2.86 MB)
Senn DB, Novick E. Suisun Bay Ammonium Synthesis. Richmond, CA: San Francisco Estuary Institute; 2014:191. (6.62 MB)

2013

McKee LJ ., Lewicki M, Schoellhamer DH, Ganju NK. Comparison of sediment supply to San Francisco Bay from watersheds draining the Bay Area and the Central Valley of California. Marine Geology Special Issue: A multi-discipline approach for understanding sediment transport and geomorphic evolution in an estuarine-coastal system. 2013. Available at: http://www.sciencedirect.com/science/article/pii/S0025322713000297.
Barnard PL, Schoellhamer DH, Jaffe BE, McKee LJ . Sediment transport in the San Francisco Bay Coastal System: An overview. Marine Geology Special Issue: A multi-discipline approach for understanding sediment transport and geomorphic evolution in an estuarine-coastal system. 2013. Available at: http://www.sciencedirect.com/science/article/pii/S0025322713000376.
Greenfield BK, Slotton DG, Harrold KH. Predictors of Mercury Spatial Patterns in San Francisco Bay Forage Fish. Environmental Toxicology and Chemistry. 2013;32(12):2728-2737. (919.57 KB)
Meadows R. Estuary News RMP Insert 2013. Estuary News. 2013. (5.93 MB)
SFEI. 2013 Pulse of the Bay: Contaminants of Emerging Concern. Richmond, CA: San Francisco Estuary Institute ; 2013:102. (17.25 MB)
Davis JA, Heim WA, Swenson S, et al. Contaminants in Fish from California Rivers and Streams, 2011. Sacramento, CA: California State Water Resources Control Board; 2013. (21.25 KB) (44.83 KB) (29.58 KB) (69.35 KB) (6.4 MB) (25.5 MB)
Willis-Norton E, Ranasinghe JA, Greenstein D, Bay S. Applying Sediment Quality Objective Assessments to San Francisco Bay Samples from 2008-2012. Richmond, CA: San Francisco Estuary Institute and Southern California Coastal Water Research Project; 2013. (2.9 MB)
Collins L, Leventhal R. Regional Curves of Hydraulic Geometry for Wadeable Streams In Marin and Sonoma Counties, San Francisco Bay Area. Watershed Sciences Berkeley and Marin County Flood Control District; 2013. (2.85 MB)

2012

Sedlak M, Greig D. Perfluoroalkyl compounds (PFCs) in wildlife from an urban estuary. Journal of Environmental Monitoring. 2012;14:146-154. doi:10.1039/C1EM10609K.
Werme C. Estuary News RMP Insert 2012. Estuary News. 2012. (1.51 MB)
SFEI. 2011 Pulse of the Estuary: Pollutant Effects on Aquatic Life. Richmond, CA: San Francisco Estuary Institute ; 2012:104. (10.81 MB)
Davis JA, Ross JRM, Bezalel SN, et al. Contaminants in Fish From the California Coast, 2009-2010 Summary Report on a Two-Year Screening Survey. Sacramento, CA: California State Water Resources Control Board; 2012. (29.4 MB) (5.98 MB) (197.15 KB) (124.98 KB) (193.59 KB) (718.39 KB) (221.35 KB)
Jones C, Yee D, Davis JA, et al. Conceptual Model of Contaminant Fate on the Margins of San Francisco Bay. Richmond, CA: SFEI; 2012:67. (3.42 MB) (5.85 MB)
Gilbreath AN, Pearce S, McKee LJ . Monitoring and Results for El Cerrito Rain Gardens. Richmond, CA: San Francisco Estuary Institute; 2012. (2.79 MB)
Allen R, David N, Franz A, et al. 2010 Annual Monitoring Results. Richmond, CA: San Francisco Estuary Institute; 2012. (6.87 MB) (4.29 MB)

2011

Gehrke GE, Blum JD, Marvin-DiPasquale M. Sources of mercury to San Francisco Bay surface sediment as revealed by mercury stable isotopes. Geochimica et Cosmochimica Acta. 2011;75(3):691-705. doi:10.1016/j.gca.2010.11.012.
San Francisco Estuary Institute. 2009 Annual Monitoring Results. Oakland, CA: San Francisco Estuary Institute; 2011. (1.91 MB)
Lowe S. Final Project Report for the Demonstration Project in Three Critical Coastal Area Watersheds. Richmond, CA: San Francisco Estuary Institute; 2011. (704.69 KB)
Gross ES, Chang S, Holleman R. Preliminary Simulations of Sediment Dynamics in the South San Francisco Bay. Oakland, CA: San Francisco Estuary Institute; 2011. (2.83 MB)

2010

Yee D, McKee LJ ., Oram JJ. A Regional Mass Balance of Methylmercury in San Francisco Bay, California, USA. Environmental Toxicology and Chemistry. 2010. (306.73 KB) (275.24 KB)
Weisberg SB, Thompson B, Huff DD, et al. Habitat-Related Benthic Macrofaunal Assemblages of Bays and Estuaries of the Western United States. Integrated Environmental Assessment and Management. 2010;8(4):638-648. (213.19 KB)
Werme C. Estuary News RMP Insert 2010. Estuary News. 2010. (4.04 MB)
Jabusch TW. Selenium in the Grasslands Watershed. Oakland, CA: San Francisco Estuary Institute; 2010:267-294.
SFEI. 2010 Pulse of the Estuary: Linking the Watersheds and the Bay. Oakland, CA: San Francisco Estuary Institute ; 2010:96. (19.17 MB)
Committee GBypass Pro. Grassland Bypass Project Report 2006-2007. Oakland: San Francisco Estuary Institute; 2010. (14.91 MB)
San Francisco Estuary Institute. 2008 RMP Annual Monitoring Results. Oakland, CA: San Francisco Estuary Institute; 2010. Available at: rmp/amr. (3.56 MB)
Greenfield BK, Jahn A. Mercury in San Francisco Bay forage fish. Oakland, Ca: San Francisco Estuary Institute; 2010. (1.08 MB)

2009

Cohen AN, Zabin CJ. Oyster shells as vectors for exotic species. Journal of Shellfish Research. 2009;28(1):163-167. doi:http://www.bioone.org/doi/abs/10.2983/035.028.0106.
Stapleton H, Blum A, Webster TF, et al. Detection of Organophosphate Flame Retardants in Furniture Foam and U.S. House Dust. Environmental Science and Technology. 2009:7490–7495. (255.57 KB)
Werme C, Klosterhaus S. Estuary News RMP Insert 2009. Estuary News. 2009. (3.26 MB)