Sean Baumgarten
Sean Baumgarten
Environmental Scientist
Resilient Landscapes Program
Carbon, Ecosystems & Climate
Historical Ecology
Terrestrial Ecology
Urban Nature Lab
(510) 746-7335
Sean Baumgarten joined SFEI’s Resilient Landscapes team in 2012. His research focuses on the historical ecology of California ecosystems, using archival data to reconstruct the form and function of past landscapes and understand how they have changed over time. Sean has conducted research on coastal, riverine, and terrestrial ecosystems throughout the Bay Area as well as in southern California and the Central Valley. Sean earned a Master of Environmental Science and Management degree with a specialization in Conservation Planning from the Bren School at UC Santa Barbara, where his research focused on developing fire management strategies for Tejon Ranch in Southern California. He received a B.S. in Wildlife, Fish, and Conservation Biology from UC Davis.
Related Projects, News, and Events

This study focuses on a segment of the Santa Ana River Parkway in and around the City of Riverside, where multiple habitat restoration projects are underway.

Hidden Nature SF brings a new perspective to our view of San Francisco, studying the city’s historical ecology in order to engage the public in re-imagining San Francisco’s ecological past, present, and future.

The Laguna de Santa Rosa (Laguna) watershed spans 256 square miles and supports a unique complex of biologically diverse ecosystems. Containing the urban centers of Santa Rosa, Sebastopol, Cotati, Rohnert Park, and Windsor, the Laguna watershed encompasses one of the largest floodplains in California. Historically the Laguna watershed supported a diverse ecosystem consisting of oak savanna/vernal pool complexes, riparian forest, emergent and off channel wetlands, and open water.

SFEI is working with partners across the Bay Area to design tools to help cities achieve biodiversity, stormwater, and climate benefits through multifunctional green infrastructure.

“Re-Oaking” is an approach to reintegrating oaks and other native trees within the developed California landscape to provide a range of ecosystem services. The concept has emerged from SFEI's research into the distribution and characteristics of California's former valley oak savannas -- a distinctive, widespread habitat that was mostly lost a century ago. Now valley oaks and other native trees are being recognized for the benefits they did -- and could again – provide, as communities design the ecologically healthy and resilient landscapes of the future.

The Laguna de Santa Rosa is an expansive freshwater wetland complex that hosts a rich diversity of plant and wildlife species, and is also home to a thriving agricultural community. Since the mid-19th century, modifications to the Laguna and its surrounding landscape have degraded habitat conditions for both wildlife and people.

SFEI completed a Restoration Plan for the Laguna de Santa Rosa in the Russian River watershed. SFEI, Sonoma Water, and the Laguna de Santa Rosa Foundation worked with technical advisors, stakeholders, tribal representatives, and local landowners to develop the Restoration Plan that provides a restoration planning framework and conceptual designs for multi-benefit habitat restoration projects that support people and wildlife.

Protecting carbon stocks and increasing carbon sequestration can support climate change mitigation and maintain healthy, resilient ecosystems. To support SFPUC managers in making informed carbon management decisions, the Alameda Watershed Carbon Assessment offers scientific guidance on the watershed’s current and potential performance as a natural climate solution. This assessment was framed by two main objectives: to quantify current carbon stocks in the Alameda Watershed, and to evaluate opportunities to enhance carbon sequestration in its vegetation and soils.

This project is a tool for planning scenarios of landscape-scale restoration. The tool is designed to inform ongoing and future restoration planning efforts. In particular, this tool will help inform implementation of restoration objectives as described in the Delta Plan, as well as the ongoing Ecosystem Amendment to Chapter 4.

The Tijuana River Valley Historical Ecology Investigation synthesized hundreds of historical maps, photographs, and texts to reconstruct the the ecological, hydrological, and geomorphic conditions of the valley prior to major European-American landscape modification.

As the largest brackish marsh on the West Coast, Suisun Marsh is a unique transitional landscape between the Bay and the Delta portions of the Estuary. The Marsh has long been managed for recreational hunting and native biodiversity, yet it is threatened by an uncertain future under climate change. Sea level rise and increasing salinity pose significant threats to the current structure and uses of the Marsh. Likely impacts include conversion of wetlands to open water, changes in species composition, increased flood risk, and drainage challenges in managed wetlands.

Look at any urban landscape in the Bay Area and the imprint of horticulture can be readily seen: plants bred to grow well in urban conditions, to require little maintenance, and to fulfill a design aesthetic. While these plants are a triumph of the success of plant propagation, they often have little connection to local ecosystems, and they do not necessarily yield the best support for native biodiversity.

Hidden Nature SF seeks to uncover the natural history of San Francisco’s past landscape. At the heart of the project is the field of historical ecology, which uses interdisciplinary science and visualization techniques to synthesize historical archival data into a completely new perspective on the familiar city. Drawing on hundreds of old maps, photographs, and textual documents, we are reconstructing and mapping the ecosystems and waterways that existed in San Francisco prior to Spanish colonization.

Nestled in the rugged coastal mountains between San Francisco and Silicon Valley lies one of the ecological treasures of the San Francisco Bay Area: the Peninsula Watershed. Home to mountain lions, marbled murrelets, towering old-growth Douglas-firs, and an immense diversity of other plants and animals, the Peninsula Watershed is a unique and wild expanse of open space just minutes from one of the most urbanized parts of California.
SFEI and our partners from the Exploratorium, the San Francisco Department of the Environment, and the Presidio Trust were joined live by over 400 participants for a conversation around the nature, both past and present, that is hidden in plain sight in San Francisco. On Wednesday, February 24th, SFEI unveiled our mapping of San Francisco’s historical ecology and shared stories that uncover the mysteries of San Francisco’s ecological past.

SFEI completed a long-term Restoration Vision for the Laguna de Santa Rosa in the Russian River watershed. SFEI, Sonoma Water, and the Laguna de Santa Rosa Foundation worked with technical advisors, stakeholders, and landowners to develop the Restoration Vision, which identifies opportunities for multi-benefit habitat restoration and land management that supports people and wildlife.

This project reconstructs the historical hydrology and ecology of the Petaluma River watershed prior to major Euro-American modification. It demonstrates the efficacy of historical hydrology and ecology in identifying and prioritizing multi-benefit restoration opportunities.

The Northern San Diego County Lagoons Historical Ecology Investigation draws on hundreds of historical documents to analyze and reconstruct historical landscape conditions for six northern San Diego County estuaries prior to the major modifications of the late 19th and 20th centuries.

During the mid-19th century, the lower Walnut Creek watershed was a landscape dominated by extensive wetlands, meandering creeks, and grassy plains. The marshes, sloughs, and meadows provided habitat and food for a huge number of wildlife species ranging from grizzly bears and elk to clapper rails and steelhead. Over the past 150 years, urban development, diking and filling of wetlands, and channelization of streams has resulted in dramatic changes to the watershed, and much of the historical habitat has been lost.

Over the past century and a half, the hydrology of the Laguna de Santa Rosa watershed has been altered by a variety land use changes, including urbanization, agricultural development, draining and filling of wetlands, and channelization of streams. These changes have impacted the function of the Laguna and Mark West Creek and contributed to a range of contemporary management problems, including habitat degradation, impaired water quality, altered sediment dynamics, salmonid stranding, flooding, and trash accumulation.
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