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Publications & Reports

Review our work products 

We provide easy access to thousands of SFEI’s reports, journal articles, books, conference papers/proceedings, factsheets, hearing summaries, maps, and more. 

These printable and downloadable materials connect our science to action, cover a broad range of topics, and have many applications. This library is searchable and filterable. If you have difficulty finding the information you are looking for, please contact us at [email protected].

Programs & Topics

Select the program or topic of your interest among the nested filters below. 

Landscape Scenario Planning Tool User Guide v3.0

Author(s): San Francisco Estuary Institute (SFEI)

2025

The Landscapes Scenario Planning Tool (LSPT) is a standardized, science-based resource for analyzing and comparing land-use scenarios in the Sacramento-San Joaquin Delta and Suisun Marsh. The tool takes data from detailed landscape maps and calculates metrics related to…

Managed wetlands for climate action: potential greenhouse gas and subsidence mitigation in the Sacramento-San Joaquin Delta

Author(s): Lydia Vaughn | Steven Deverel | Stephanie Panlasigui | Judith Drexler | Marc Olds | Jose Diaz | Kendall Harris | James Morris | Letitia Grenier | April Robinson | Donna Ball

2024

In the Sacramento–San Joaquin Delta (Delta), widespread drainage of historical wetlands has led to extensive subsidence and peat carbon losses, as well as high ongoing greenhouse gas (GHG) emissions. Large-scale wetland restoration and conversion to rice fields has the…

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An assessment of future tidal marsh resilience in the San Francisco Estuary through modeling and quantifiable metrics of sustainability

Author(s): James Morris | Judith Drexler | Lydia Vaughn | April Robinson

2022

Quantitative, broadly applicable metrics of resilience are needed to effectively manage tidal marshes into the future. Here we quantified three metrics of temporal marsh resilience: time to marsh drowning, time to marsh tipping point, and the probability of a regime shift,…

Resilient Staten Island: Landscape Scenario Analysis Pilot Application

Author(s): Alison Whipple | Letitia Grenier | Samuel Safran | Dawit Zeleke | Emily Wells | Steven Deverel | Marc Olds | Spencer Cole | José Rodríguez-Flores | Alexander Guzman | Josué Medellín-Azuara

2022

A central motivating question for the Sacramento-San Joaquin Delta science and management community is what should be done, where and when, to support future Delta landscapes that are ecologically and economically viable and resilient to change. Actions must be taken that…

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Delta Landscapes Primary Production: Past, Present, Future

Author(s): Lydia Vaughn | Samuel Safran | April Robinson | Alison Whipple | Amy Richey | Letitia Grenier | James Cloern | Stephen Andrews | Katharyn Boyer | Judith Drexler | Emily Howe | Robert Naiman | Melissa Patten | James Pinckney

2020

This report describes the Delta Landscapes Primary Production project, which quantifies how landscape change in the Delta has altered the quantity and character of primary production. Combining historical and modern maps with simple models of production for five dominant…

Chinook Salmon Habitat Quantification Tool: User Guide (Version 1.0)

Author(s): Alison Whipple | T. Grantham | Gloria Desanker | L Hunt | A. Merrill | B. Hackenjos | Ruth Askevold

2019

The Salmon Habitat Quantification Tool provides systematic, transparent, and consistent accounting of the spatial extent, temporal variability, and quality of salmon habitat on the landscape. It is part of the multi-species assessment of the Central Valley Habitat…

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A Delta Renewed: A Guide to Science-Based Ecological Restoration in the Sacramento-San Joaquin Delta

Author(s): April Robinson | Samuel Safran | Julie Beagle | Letitia Grenier | Robin Grossinger | Erica Spotswood | Scott Dusterhoff | Amy Richey

2016

This report offers guidance for creating and maintaining landscapes in the Sacramento-San Joaquin Delta that support desired ecological functions, while retaining the overall agricultural character and water-supply service of the region. Based on extensive research into how…

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Sacramento-San Joaquin Delta Historical Ecology Investigation: Exploring Pattern and Process

Author(s): Alison Whipple | Robin Grossinger | D. Rankin | B. Stanford | Ruth Askevold

2012

The Sacramento-San Joaquin Delta has been transformed from the largest wetland system on the Pacific Coast of the United States to highly productive farmland and other uses embodying California’s water struggles. The Delta comprises the upper extent of the San Francisco…