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Oyster shells as vectors for exotic species. Journal of Shellfish Research 28 (1), 163-167 . SFEI Contribution No. 709.
2009. Zebra & quagga mussel invasions in the western US. International Association of Great Lakes Research (IAGLR).
2008. The colonial ascidian Didemnum sp. A: Current distribution, basic biology, and potential threat to marine communities of the northeast and west coasts of North America. Journal of Experimental Marine Biology and Ecology 99-108.
2007. 
Introduced Marine and Estuarine Invertebrates. In The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. . The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. University of California Press: Berkeley, Ca.
2007. Introduction for Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay. In Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay. Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay. NOAA National Marine Fisheries Service. p 35.
2007. Phytoplankton and bacterial assemblages in ballast water of U.S. military ships as a function of port of origin, voyage time, and ocean exchange practices. Harmful Algae 6, 486-518.
2007. 
Potential Distribution of Zebra Mussels (Dreissena polymorpha) and Quagga Mussels (Dreissena bugensis) in California Phase 1 Report. A Report for the California Department of Fish and Game. San Francisco Estuary Institute.
2007. 
Preventing the introduction of non-native species with imported oyster shell used for cultch in restoration projects: an inspection, and consideration of future protocols. Proceedings of the 2006 West Coast Native Oyster Restoration Workshop.
2007. 
Shellfish Beds in Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay. In Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay. Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay. NOAA National Marine Fisheries Service: Santa Rosa, CA. pp 50-55.
2007. Tanaidacea in The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. In The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast.. . The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. University of California Press: Berkeley, Ca.
2007. Bridging Divides: Maritime Canals as Invasion Corridors. Monographiae Biologicae 83. Kluwer Academic Publishing: Dordrecht, The Netherlands.
2006. Characterizing vectors of marine invasions. In Marine Bioinvasions: Ecology, Conservation and Management Perspectives. . Marine Bioinvasions: Ecology, Conservation and Management Perspectives. Springer: Heidelberg, Germany.
2006. Environmental threats to tidal marsh vertebrates of the San Francisco Bay Estuary. Studies in Avian Biology 32, 176-339 . SFEI Contribution No. 489.
2006. 
Inspection for Live Marine Invertebrates in an Oyster Shell Pile at Drakes Bay Oyster Company. San Francisco Estuary Institute.
2006. 
The Panama Canal: Cutting a canal through Central America. In Bridging Divides: Maritime Canals as Invasion Corridor. . Bridging Divides: Maritime Canals as Invasion Corridor. Kluwer Academic Publishing: Dordrecht, The Netherlands.
2006. The Panama Canal: Cutting a canal through Central America. In Bridging Divides: Maritime Canals as Invasion Corridor. . Bridging Divides: Maritime Canals as Invasion Corridor. Kluwer Academic Publishing: Dordrecht, The Netherlands.
2006. The Panama Canal: Species Introductions and the Panama Canal. In Bridging Divides: Maritime Canals as Invasion Corridors. . Bridging Divides: Maritime Canals as Invasion Corridors. Kluwer Academic Publishing: Dordrecht, The Netherlands.
2006. The Panama Canal: Species Introductions and the Panama Canal. In Bridging Divides: Maritime Canals as Invasion Corridors. . Bridging Divides: Maritime Canals as Invasion Corridors. Kluwer Academic Publishing: Dordrecht, The Netherlands.
2006. Shells as vectors. Proceedings of the 2006 West Coast Native Oyster Restoration Workshop.
2006. Approaches to presenting the science of the San Francisco Bay/Delta estuary. SFEI Contribution No. 514. San Francisco Estuary Institute: Oakland, CA.
2005. Bay Science: A Report to the Science Content Committee of The Bay Center. San Francisco Estuary Institute.
2005. Bridging Divides: Maritime Canals as Invasion Corridors. . Kluwer Academic Publishing: Dordrecht, The Netherlands.
2005. Bridging Divides: Maritime Canals as Invasion Corridors. . Kluwer Academic Publishing: Dordrecht, The Netherlands.
2005. Global Spread of Marine Organisms in the Baitworm Trade. SFEI Contribution No. 455. San Francisco Estuary Institute: Oakland, CA.
2005. Impact of invasive Spartina alterniflora on song sparrow and marsh wren populations in San Francisco Bay salt marshes. Proceedings of the International Spartina Conference.
2005. The invasive colonial ascidian Didemnum sp.: current distribution, basic biology, and potential threat to marine communities of the northeast and west coasts of the United States. J. of Experimental Marine Biology and Ecology . SFEI Contribution No. 498.
2005. Order Tanaidacea. In The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coasts. . The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coasts. University of California Press: Berkeley, CA.
2005. Overview of 2004/05 Rapid Assessment Shore and Channel Surveys for Exotic Species in San Francisco Bay. SFEI Contribution No. 452. San Francisco Estuary Institute: Oakland, CA.
2005. 
Project Report: 2004 Rapid Assessment Survey for Exotic Species in San Francisco Bay. SFEI Contribution No. 451. San Francisco Estuary Institute: Oakland, Ca.
2005. Rapid Assessment Channel Survey for Exotic Species in San Francisco Bay - November 2005. SFEI Contribution No. 454. San Francisco Estuary Institute: Oakland, CA. p 7.
2005. 
Rapid Assessment Shore Survey for Exotic Species in San Francisco Bay - May 2004. SFEI Contribution No. 453. San Francisco Estuary Institute: Oakland, CA. p 32.
2005. 
Rapid Assessment Survey for Exotic Organisms in Southern California Bays and Harbors, and Abundance in Port and Non-port Areas. Biological Invasions Volume 7, 995 - 1002 . SFEI Contribution No. 423.
2005. 
A review of Zebra Mussels' Environmental Requirements. . SFEI Contribution No. 420. San Francisco Estuary Institute: Sacramento, CA.
2005. 
Role of the Panama Canal in Introducing Exotic Organisms. In Bridging Divides - Man-made Canals and Species Invasions. Bridging Divides - Man-made Canals and Species Invasions. Kluwer Academic Publishing.
2005. Year-end Report to the National Science Foundation. SFEI Contribution No. 456. San Francisco Estuary Institute: Oakland, CA.
2005. An Exotic Species Detection Program for Puget Sound. SFEI Contribution No. 380. San Francisco Estuary Institute: Oakland.
2004. 
An Exotic Species Detection Program for the Lower Columbia River Estuary. SFEI Contribution No. 381. San Francisco Estuary Institute: Oakland.
2004. 
An Exotic Species Detection Program for Tillamook Bay. SFEI Contribution No. 379. San Francisco Estuary Institute: Oakland.
2004. 
2004.
Invasions in the sea. SFEI Contribution No. 312. Vol. 22, pp 37-41.
2004. 
Summary of data and analyses indicating that exotic species have impaired the beneficial uses of certain California waters. SFEI Contribution No. 382. San Francisco Estuary Institute: Oakland.
2004. 
Episodic global dispersal in shallow water marine organisms: The case history of the European shore crabs Carcinus maenas and Carcinus aestuarii. Biogeography 30, 1809-1820 . SFEI Contribution No. 383.
2003. 
Exotic Organisms in Southern California Bays and Harbors. Page 22 in:. In Abstracts, Third International Conf. on Marine Bioinvasions, Mar. 16-19, Scripps Institution of Oceanography, La Jolla, CA. Abstracts, Third International Conf. on Marine Bioinvasions, Mar. 16-19, Scripps Institution of Oceanography, La Jolla, CA. p p. 22.
2003. Introduction to the San Francisco Estuary. San Francisco Estuary Institute, Save the Bay and San Francisco Estuary Project: Oakland,CA.
2003. 
Invasions in Aquatic Ecosystems: Impacts on Restoration and Potential for Control. SFEI Contribution No. 512.
2003. 2003.
On Mitten Crabs and Lung Flukes, 16, No. 2.
2003. On Mitten Crabs and Lung Flukes. In IEP Newsletter. IEP Newsletter. Vol. 16, pp 48-51.
2003. 
Asian Kelp Undaria pinnatifida in the northeastern Pacific Ocean. Biological Invasions 4, 333-338 . SFEI Contribution No. 417.
2002. 
Dispersal Ecology. Blackwell Publishing: Oxford.
2002. Exotic organisms in southern California Bays and Harbors. Marine Bioinvasions Conference . SFEI Contribution No. 481.
2002. 2002.
The highly invaded ecosystem of San Francisco Bay. Cawthron Institute, Nelson, New Zealand.
2002. The impact of an invasive Atlantic cordgrass (Spartina alterniflora) on San Francisco Bay Song Sparrow populations: direct and indirect influence. In Terrestrial Vertebrates of Tidal Marshes: Evolution, Ecology and Conservation. Terrestrial Vertebrates of Tidal Marshes: Evolution, Ecology and Conservation. Silver Spring, MD.
2002. Marine Exotic Species in the Caribbean: A Progress Report. University of Puerto Rico/Isla Magueyes Laboratory, La Parguera, Puerto Rico.
2002. Presence of marine invasive species along the coast of Massachusetts. SFEI Contribution No. 509.
2002. Project Report for the Southern California Exotics Expedition 2000 A Rapid Assessment Survey of Exotic Species in Sheltered Coastal Waters. SFEI Contribution No. 384. San Francisco Estuary Institute: Oakland.
2002. 
A Rapid Assessment Survey of Exotic Species in Sheltered Coastal Waters. SFEI Contribution No. 508.
2002. The release of pest species by marine aquaculture: lessons from a South African parasite introduced into California waters. Invasions in Aquatic Ecosystems: Impacts on Restoration and Potential for Control, Proceedings of a Workshop, April 25, 1998, 9-13.
2002. 
The release of pest species by marine aquaculture: lessons from a South African parasite introduced into California waters. Invasions in Aquatic Ecosystems: Impacts on Restoration and Potential for Control, Proceedings of a Workshop, April 25, 1998, 9-13.
2002. 
Success factors in the establishment of human-dispersed organisms. In Dispersal Ecology: The 42nd Symposium of the British Ecological Society, held at the University of Reading, 2-5 April 2001. . Dispersal Ecology: The 42nd Symposium of the British Ecological Society, held at the University of Reading, 2-5 April 2001. British Ecological Society and Blackwell Publishing: Oxford UK. pp 374-394.
2002. 
Case Study 2.5: Petition for U.S. federal action on the green seaweed Caulerpa taxifolia. . United Nations Global Invasive Species Program. CAB International, Wallingford, Oxon, UK. p 31.
2001. Case Study 3.16: Transfer of pathogens and other species via oyster culture. . United Nations Global Invasive Species Program. CAB International: Wallingford, Oxon, UK. p p 92.
2001. Case study: hitchhikers in or on marine baitworms and their packing material. In Toolkit for Managing Invasive Species. Toolkit for Managing Invasive Species. United Nations Global Invasive Species Program.
2001. Case study: transfer of pathogens and other species via oyster culture. In Toolkit for Managing Invasive Species. Toolkit for Managing Invasive Species. United Nations Global Invasive Species Program.
2001. Impacts from the Asian clam Potamocorbula amurensis. In National Management Plan. National Management Plan. National Invasive Species Council: Washington DC.
2001. An Introduction to the San Francisco Estuary Third Edition. San Francisco Estuary Project, Oakland CA, Save The Bay, Oakland CA and San Francisco Estuary Institute, Richmond CA: Oakland, Ca. Vol. Third Edit.
2001. 
Invasions in the San Francisco Estuary. In National Management Plan. National Management Plan. National Invasive Species Council: Washington DC.
2001. Investigations into the Introduction of Non-indigenous Marine Organisms via the Cross-Continental Trade in Marine Baitworms. SFEI Contribution No. 357. San Francisco Estuary Institute: Richmond CA.
2001. 
The Potential Distribution of Chinese Mitten Crabs (Eriocheir sinensis) in selected waters of the Western United States with U.S. Bureau of Reclamation Facilities. SFEI Contribution No. 353. United States Department of the Interior, Bureau of Reclamation, Mid-Pacific Region and the Technical Service Center. Vol. 21.
2001. 
Project Report for the Southern California Exotics Expedition 2000: A Rapid Assessment Survey of Exotic Species in Sheltered Coastal Waters. Appendix C in:. . California Department of Fish and Game, Office of Oil Spill Prevention and Response, Sacramento CA.
2001. Rapid Assessment Survey of nonindigenous species in coastal Massachusetts. In: Abstracts, Second International Conf. on Marine Bioinvasions, April 9-11, 2001, New Orleans LA..
2001. Rapid Assessment Survey of the presence of marine invasive species along the coast of Massachusetts (abstract). New England Estuarine Research Society Abstracts, Spring Meeting, May 31-June 3, 2001.
2001. Report of the Washington State Exotics Expedition 2000. SFEI Contribution No. 355. Nearshore Habitat Program, Washington State Department of Natural Resources: Olympia WA.
2001. 
Success factors in human-dispersed organisms. Dispersal, Annual Symposium of the British Ecological Society, Page 8.
2001. Success factors in human-dispersed organisms. Page 8 in:. University of Reading, UK. British Ecological Society, London. p p. 8.
2001. Testing Ballast Water Treatment at a Municipal Wastewater Treatment Plant. California Sea Grant/National Sea Grant College Program, La Jolla CA.
2001. Zebra Mussel's Calcium Threshold and Implications for its Potential Distribution in North America. SFEI Contribution No. 356. San Francisco Estuary Institute: Richmond CA.
2001. 
"Case studies" on exotic species transported with oyster and marine baitworm shipments. In Toolkit on Best Practices for Prevention and Management. Toolkit on Best Practices for Prevention and Management. UN Global Invasive Species Programme.
2000. Invasion by a Japanese marine microorganism in western North America. Hydrobiologia 421, 25-30 . SFEI Contribution No. 343.
2000. 
Invasions status and policy on the U. S. west coast. in: Proc. First Nat'l Conf. on Marine Bioinvasions, Jan. 24-27, 1999, Cambridge MA, 40-45.
2000. 
The regulation of biological pollution: Preventing exotic species invasions from ballast water discharged into California coastal waters. Golden Gate University Law Review 30, 787-883 . SFEI Contribution No. 336.
2000. 
Weeding the garden. In Preserving Wildlife: An International Perspective. . Preserving Wildlife: An International Perspective. Prometheus Books: Amherst NY. pp 84-92.
2000. 
The 1998 Puget Sound Expedition: a rapid assessment survey for nonindigenous species in the shallow waters of Puget Sound. First National Conference on Marine Bioinvasions.
1999. 
Aquatic bioinvasions in the San Francisco Estuary. Berkeley Society for Conservation Biology Annual Meeting.
1999. Breifing Paper on a Monitoring Plan for Nonindigenous Organisms in the San Francisco Bay/Delta Estuary. A report for CALFED and the California Urban Water Agencies. San Francisco Estuary Institute. p Richmond CA.
1999. Briefing Paper on a Monitoring Plan for Nonindigenous Organisms in the San Francisco Bay/Delta Estuary. SFEI Contribution No. 325. San Francisco Estuary Institute: Richmond CA.
1999. 
Extent and impacts of ballast water invasions. SFEI Contribution No. 326. West Coast Ballast Outreach Project: Davis, CA. Vol. 1, pp 2-3.
1999. 
Invasions status and policy on the U. S. west coast. First National Conference on Marine Bioinvasion, 40-45.
1999. Prevention vs. control of biological invasions. First National Conference on Marine Bioinvasions.
1999. Status of invasions and policy response on the U. S. west coast. First National Conference on Marine Bioinvasions.
1999. 1999.
Accelerating invasion rate in a highly invaded estuary. Science 279, 555-558 . SFEI Contribution No. 226.
1998. 