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O'Connor, J. M.; Daum, T. H. 1992. Status and Assessment of Selected Monitoring Programs in the San Francisco Esturary. SFEI Contribution No. 172. San Francisco Estuary Institute: Richmond, Ca. p 128.
O'Connor, J. M. 1991. Evaluation of Turbidity and Turbidity Related Effects on the Biota of the San Francisco Bay-Delta Estuary. SFEI Contribution No. 169. San Francisco Estuary Institute: Richmond, CA. p 84.
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Novick, E.; Senn, D. B. 2014. External Nutrient Loads to San Francisco Bay. SFEI Contribution No. 704. San Francisco Estuary Institute: Richmond, CA. p 98.
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Nordby, C. 2001. Adult song sparrows do not alter their song repertoires. Ethology . SFEI Contribution No. 482.
NOAA,. 2007. San Francisco Bay, CA: Comprehensive ecosystem evaluation needed to discern causes of chlorophyll a increases. In 2007 National Eutrophication Assessment. 2007 National Eutrophication Assessment. Washington, D.C. pp 113-114.
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Monroe, M.; Olofson, P. R.; Collins, J. N.; Grossinger, R. M.; Haltiner, J.; Wilcox, C. 1999. Baylands Ecosystem Habitat Goals. SFEI Contribution No. 330. U. S. Environmental Protection Agency, San Francisco, Calif./S.F. Bay Regional Water Quality Control Board, Oakland, Calif. p 328.
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Melwani, A. R.; Greenfield, B. K.; Byron, E. R. 2009. Empirical estimation of biota exposure range for calculation of bioaccumulation parameters. Integrated Environmental Assessment and Management 5 . SFEI Contribution No. 573.
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Meadows, R. 2013. Estuary News RMP Insert 2013. Estuary News. San Francisco Estuary Institute: Richmond, CA.
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McKnight, K.; Dusterhoff, S. D.; Grossinger, R. M.; Askevold, R. A. 2018. Resilient Landscape Vision for the Calabazas Creek, San Tomas Aquino Creek, and Pond A8 Area: Bayland-Creek Reconnection Opportunities. SFEI Contribution No. 870. San Francisco Estuary Institute-Aquatic Science Center: Richmond, CA. p 40.

This report proposes a multi-faceted redesign of the South San Francisco Bay shoreline at the interface with Calabazas and San Tomas Aquino creeks. Recognizing the opportunities presented by changing land use and new challenges, such as accelerated sea-level rise, we explore in this report a reconfigured shoreline that could improve ecosystem health and resilience, reduce maintenance costs, and protect surrounding infrastructure.

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McKee, L. J. .; Hoenicke, R.; Leatherbarrow, J. E. 2001. Contaminant contributions from the Guadalupe River and Coyote Creek watersheds to the lower South San Francisco Bay. Abstracts of the 5th Biannual State of the Estuary Conference – San Francisco Estuary: Achievements, trends and the future.
McKee, L. J. .; Wittner, E.; Leatherbarrow, J. E.; Lucas, V.; Grossinger, R. M. 2001. Building a regionally consistent base map for the Bay Area: The National Hydrography Data Set. Abstracts of the 5th Biannual State of the Estuary Conference – San Francisco Estuary: Achievements, trends and the future, pp 108.
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McKee, L. J. .; Pearce, S.; Shonkoff, S. 2006. Pinole Creek Sediment Source Assessment: Pavon Creeks Sub-basin. SFEI Contribution No. 515. San Francisco Estuary Institute. p 67.
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McKee, L. J. . 2005. Sources, Pathways, and Loadings: 5-Year Work Plan (2005-2009). SFEI Contribution No. 406. San Francisco Estuary Institute. p 25.
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