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Cohen, A. N. 1997. The San Francisco Estuary: A model system for invasions research. San Francisco Estuary Institute: Seattle, WA (abstract).
Cohen, A. N.; Zabin, C. J. 2009. Oyster shells as vectors for exotic species. Journal of Shellfish Research 28 (1), 163-167 . SFEI Contribution No. 709.
Cohen, A. N. 2005. A review of Zebra Mussels' Environmental Requirements. Resources, C. A. Department, Ed.. SFEI Contribution No. 420. San Francisco Estuary Institute: Sacramento, CA.
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Cohen, A. N. 1996. Stopping ballast water invaders. Native Species Network 1, 1.
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Cohen, A. N. 2000. Weeding the garden. In Preserving Wildlife: An International Perspective. Michael, M. A., Ed.. Preserving Wildlife: An International Perspective. Prometheus Books: Amherst NY. pp 84-92.
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Cohen, A. N. 1997. The invasion of the estuaries. Proc. Second International Spartina Conference, Mar 20-21, 1997, 6-9.
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Cohen, A. N.; Carlton, J. T. 1998. Accelerating invasion rate in a highly invaded estuary. Science 279, 555-558 . SFEI Contribution No. 226.
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Cohen, A. N.; Weinstein, A. 1998. The Potential Distribution and Abundance of Zebra Mussels in California. SFEI Contribution No. 225. San Francisco Estuary Institute: Richmond, CA.
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Cohen, A. N.; Weinstein, A. 1998. Methods and Data for Analysis of Potential Distribution and Abundance of Zebra Mussels in California. SFEI Contribution No. 225. A report for CALFED and the California Urban Water Agencies. San Francisco Estuary Institute: Richmond CA.
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Cohen, A. N. 2000. Invasions status and policy on the U. S. west coast. in: Proc. First Nat'l Conf. on Marine Bioinvasions, Jan. 24-27, 1999, Cambridge MA, 40-45.
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Cohen, A. N. 1999. Extent and impacts of ballast water invasions. SFEI Contribution No. 326. West Coast Ballast Outreach Project: Davis, CA. Vol. 1, pp 2-3.
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Cohen, A. N. 1999. Briefing Paper on a Monitoring Plan for Nonindigenous Organisms in the San Francisco Bay/Delta Estuary. SFEI Contribution No. 325. San Francisco Estuary Institute: Richmond CA.
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Cohen, A. N.; Weinstein, A. 2001. Zebra Mussel's Calcium Threshold and Implications for its Potential Distribution in North America. SFEI Contribution No. 356. San Francisco Estuary Institute: Richmond CA.
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Cohen, A. N. 2002. The release of pest species by marine aquaculture: lessons from a South African parasite introduced into California waters. Invasions in Aquatic Ecosystems: Impacts on Restoration and Potential for Control, Proceedings of a Workshop, April 25, 1998, 9-13.
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Cohen, A. N. 2003. On Mitten Crabs and Lung Flukes. In IEP Newsletter. IEP Newsletter. Vol. 16, pp 48-51.
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Cohen, A. N. 2003. Introduction to the San Francisco Estuary. San Francisco Estuary Institute, Save the Bay and San Francisco Estuary Project: Oakland,CA.
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Cohen, A. N. 2004. Invasions in the sea. SFEI Contribution No. 312. Vol. 22, pp 37-41.
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Cohen, A. N. 2004. An Exotic Species Detection Program for the Lower Columbia River Estuary. SFEI Contribution No. 381. San Francisco Estuary Institute: Oakland.
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Cohen, A. N. 2005. Overview of 2004/05 Rapid Assessment Shore and Channel Surveys for Exotic Species in San Francisco Bay. SFEI Contribution No. 452. San Francisco Estuary Institute: Oakland, CA.
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Cohen, A. N. 2002. The highly invaded ecosystem of San Francisco Bay. Cawthron Institute, Nelson, New Zealand.
Cohen, A. N. 1988. Recalculating the Tule Factor. A report for The Bay Institute of San Francisco: Sausalito, CA.
Cohen, A. N. 1988. Subsides in the Central Utah Project: Whose CUP is Running over?. Report for the Natural Resources Defense Council: San Francisco, CA.
Cohen, A. N. 1989. Threatened in the nest. Pacific Discovery (Calif. Acad. Sci.) 42, 6-13.
Cohen, A. N. 1989. New Justifications for Traditional Types of Water Projects, University of California: Berkeley, CA.
Cohen, A. N. 1991. China Camp: A salt marsh guide. Pacific Discovery (Calif. Acad. Sci.) 44, 24-29.
Cohen, A. N.; Gottleib, R. 1991. Water and GrowthL Restructuring the Relationship. Public Officials for Water and Environmental Reform: Sacramento, CA.
Cohen, A. N. 1994. Impacts of invasions in the Bay and Delta. Abs. Proc. 75th Ann. Mtg., Pac. Div. Amer. Assoc. Adv. Sci..
Cohen, A. N. 1997. Marine biological invasions: lessons from the San Francisco Estuary. Ann. Mtg., Estuarine Research Federation, Providence RI (abstract)..
Cohen, A. N. 1997. Biological invasions: An unregulated threat to estuarine biodiversity. Ann. Mtg., Society for Conservation Biology, Victoria BC (abstract)..
Cohen, A. N. 1997. Green crabs disrupting fisheries worldwide. p 7 . SFEI Contribution No. 199.
Cohen, A. N. 1998. Biological invasions in the San Francisco Estuary. Olin, P. G., Cassell, J. L., Eds.. California Sea Grant College System, University of California, La Jolla CA. pp 7-8.
Cohen, A. N. 1996. Gateway to the Inland Coast: The Story of the Carquinez Strait. California State Lands Commission: Sacramento CA.
Cohen, A. N. 1999. Prevention vs. control of biological invasions. First National Conference on Marine Bioinvasions.
Cohen, A. N. 1999. Status of invasions and policy response on the U. S. west coast. First National Conference on Marine Bioinvasions.
Cohen, A. N.; Weinstein, A. 1998. The potential distribution and abundance of the zebra mussel in California. Eighth International Zebra Mussel and Aquatic Nuisance Species Conference, 65.
Cohen, A. N. 1999. Breifing Paper on a Monitoring Plan for Nonindigenous Organisms in the San Francisco Bay/Delta Estuary. A report for CALFED and the California Urban Water Agencies. San Francisco Estuary Institute. p Richmond CA.
Cohen, A. N.; Weinstein, A.; Carlton, J. T. 1999. Aquatic bioinvasions in the San Francisco Estuary. Berkeley Society for Conservation Biology Annual Meeting.
Cohen, A. N. 2000. "Case studies" on exotic species transported with oyster and marine baitworm shipments. In Toolkit on Best Practices for Prevention and Management. Toolkit on Best Practices for Prevention and Management. UN Global Invasive Species Programme.
Cohen, A. N. 2001. Success factors in human-dispersed organisms. Dispersal, Annual Symposium of the British Ecological Society, Page 8.
Cohen, A. N. 2001. Invasions in the San Francisco Estuary. In National Management Plan. National Management Plan. National Invasive Species Council: Washington DC.
Cohen, A. N. 2001. Success factors in human-dispersed organisms. Page 8 in:. University of Reading, UK. British Ecological Society, London. p p. 8.
Cohen, A. N. 2001. Case study: transfer of pathogens and other species via oyster culture. In Toolkit for Managing Invasive Species. Toolkit for Managing Invasive Species. United Nations Global Invasive Species Program.
Cohen, A. N. 2001. Case study: hitchhikers in or on marine baitworms and their packing material. In Toolkit for Managing Invasive Species. Toolkit for Managing Invasive Species. United Nations Global Invasive Species Program.
Cohen, A. N.; Woo, M.; Jabari, E. 2001. Testing Ballast Water Treatment at a Municipal Wastewater Treatment Plant. California Sea Grant/National Sea Grant College Program, La Jolla CA.
Cohen, A. N. 2001. Case Study 2.5: Petition for U.S. federal action on the green seaweed Caulerpa taxifolia. Wittenberg, R., Cock, M. J. W., Eds.. United Nations Global Invasive Species Program. CAB International, Wallingford, Oxon, UK. p 31.
Cohen, A. N.; Tyler, S.; Mathieson, A.; Dyrynda, P.; Dean, H.; Calder, D.; Bullock, R.; Lambert, C.; Chapman, J.; Pederson, J.; et al. 2001. Rapid Assessment Survey of nonindigenous species in coastal Massachusetts. In: Abstracts, Second International Conf. on Marine Bioinvasions, April 9-11, 2001, New Orleans LA..
Cohen, A. N. 2002. Exotic organisms in southern California Bays and Harbors. Marine Bioinvasions Conference . SFEI Contribution No. 481.
Cohen, A. N. 2002. Dispersal Ecology. Blackwell Publishing: Oxford.
Cohen, A. N. 2005. Role of the Panama Canal in Introducing Exotic Organisms. In Bridging Divides - Man-made Canals and Species Invasions. Bridging Divides - Man-made Canals and Species Invasions. Kluwer Academic Publishing.
Cohen, A. N. 2005. Project Report: 2004 Rapid Assessment Survey for Exotic Species in San Francisco Bay. SFEI Contribution No. 451. San Francisco Estuary Institute: Oakland, Ca.
Cohen, A. N. 2005. Order Tanaidacea. In The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coasts. Carlton, J. T., Ed.. The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coasts. University of California Press: Berkeley, CA.
Cohen, A. N.; Nordby, J. C. 2005. Year-end Report to the National Science Foundation. SFEI Contribution No. 456. San Francisco Estuary Institute: Oakland, CA.
Cohen, A. N.; Weinstein, A.; Carlton, J. T.; Emmett, M. A.; Lau, W. 2005. Global Spread of Marine Organisms in the Baitworm Trade. SFEI Contribution No. 455. San Francisco Estuary Institute: Oakland, CA.
Cohen, A. N.; Zabin, C. J. 2006. Shells as vectors. Proceedings of the 2006 West Coast Native Oyster Restoration Workshop.
Cohen, A. N. 2007. Tanaidacea in The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. In The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast.. Carlton, J. T., Ed.. The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. University of California Press: Berkeley, Ca.
Cohen, A. N.; Schaeffer, K.; Cosentino-Manning, N. 2007. Shellfish Beds in Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay. In Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay. Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay. NOAA National Marine Fisheries Service: Santa Rosa, CA. pp 50-55.
Cohen, A. N.; Carlton, J. T. 2007. Introduced Marine and Estuarine Invertebrates. In The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. Carlton, J. T., Ed.. The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. University of California Press: Berkeley, Ca.
Cohen, A. N. 2005. Bridging Divides: Maritime Canals as Invasion Corridors. Cohen, A. N., Gollasch, S., Galil, B. S., Eds.. Kluwer Academic Publishing: Dordrecht, The Netherlands.
Cloern, J. E.; Safran, S. M.; Vaughn, L. Smith; Robinson, A.; Whipple, A.; Boyer, K. E.; Drexler, J. Z.; Naiman, R. J.; Pinckney, J. L.; Howe, E. R.; et al. 2021. On the human appropriation of wetland primary production. Science of the Total Environment 785.

Humans are changing the Earth's surface at an accelerating pace, with significant consequences for ecosystems and their biodiversity. Landscape transformation has far-reaching implications including reduced net primary production (NPP) available to support ecosystems, reduced energy supplies to consumers, and disruption of ecosystem services such as carbon storage. Anthropogenic activities have reduced global NPP available to terrestrial ecosystems by nearly 25%, but the loss of NPP from wetland ecosystems is unknown. We used a simple approach to estimate aquatic NPP from measured habitat areas and habitat-specific areal productivity in the largest wetland complex on the USA west coast, comparing historical and modern landscapes and a scenario of wetland restoration. Results show that a 77% loss of wetland habitats (primarily marshes) has reduced ecosystem NPP by 94%, C (energy) flow to herbivores by 89%, and detritus production by 94%. Our results also show that attainment of habitat restoration goals could recover 12% of lost NPP and measurably increase carbon flow to consumers, including at-risk species and their food resources. This case study illustrates how a simple approach for quantifying the loss of NPP from measured habitat losses can guide wetland conservation plans by establishing historical baselines, projecting functional outcomes of different restoration scenarios, and establishing performance metrics to gauge success.