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Thompson, B.; Chapman, J. 1997. General guidelines for using the sediment quality triad. Mar. Poll. Bull 34, 368-372 . SFEI Contribution No. 198.
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Anderson, B.; Phillips, B. M.; Hunt, J.; Taberski, K.; Thompson, B. 1997. Relationship Between Sediment Toxicity and Contamination in San Francisco Bay. SFEI Contribution No. 27. San Francisco Estuary Institute: Oakland, CA. pp 285-309.
Thompson, B. 1994. Research Recommendations for the San Francisco Estuary: Understanding the Ecosystem. SFEI Contribution No. 181. San Francisco Estuary Institue: Richmond, Ca. p 49.
Lowe, S.; Thompson, B.; Kellogg, M. 2000. Results of the Benthic Pilot Study 1994 - 1997, Part 1. SFEI Contribution No. 39. San Francisco Estuary Institute: Richmond, CA.
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Smith, R.; Thompson, B. 1994. Towards an Optimal Sampling Design for the RMP. SFEI Contribution No. 6. San Francisco Estuary Institute: Richmond, CA.