Sorted by Author
Sort By: Title | Author | Year
Title | Author | Year | Link |
SFEI Program |
| Recommendations for Improvement of RMP Sediment Monitoring | Abu-Saba, K.; Amdur, J.; Anderson, B.; Brown, C.; Daum, T.; Davis, J. A.; Delorey, J.; Flegal, R.; Gregg, J.; Hornberger, M.; Lee III, H.; Lowe, S.; Luoma, S. N.; Scholelhamer, D.; Taberski, K.; Thompson, B.; Young, D. | 1999 | HTML PDF | RMP |
| Spatial and Temporal Variability in the Aquatic Cycling of Chromium | Abu-Saba, K. | 1998 | HTML | RMP |
| Patterns and trends in sediment toxicity in the San Francisco Estuary | Anderson, B.; Hunt, J.; Phillips, B; Thompson, B.; Lowe, S.; Taberski, K.; Carr, R. S. | 2007 | RMP | |
| Summary of 10 years of sediment toxicity monitoring for the San Francisco Estuary RMP | Anderson, B.; Phillips, B. M.; Hunt, J. A.; Nicely, P.; Tjeerdema, R.; Thompson, B.; Lowe, S.; Davis, J. A.; Taberski, K. | 2003 | PPT | RMP |
| Sediment Toxicity Identification Evaluations San Francisco Bay RMP for Trace Substances - Progress Report | Anderson, B. S.; Phillips, B. M.; Hunt, J. W. | 2001 | RMP | |
| Keynote Address for AHI Workshop on TIE's Status of TIE's as a Regulatory Tool in S.F. Bay Region | Aquatic Habitat Institute | 1993 | AHI | |
| Estuarine Data Index: A Guide to Bay-Delta Research and Monitoring Programs, Volume I | Aquatic Habitat Institute | 1990 | AHI | |
| Estuarine Data Index: A Guide to Bay-Delta Research and Monitoring Programs, Volume 2 | Aquatic Habitat Institute | 1990 | AHI | |
| Proceedings of a Workshop on Chronic Toxicity Identification Evaluations in the San Francisco Bay Region | Aquatic Habitat Institute | 1992 | AHI | |
| Historical Ecology Informing Restoration in East Contra Costa County: Wetland Restoration Opportunities on a Tributary to Brushy Creek (Souza II Property) | Askevold, R.; Fateman, A.; Whipple, A.; Stanford, B.; Grossinger, R. M.; Kopchik, J. | 2009 | HEP | |
| Interpreting Historical Maps to Reconstruct Past Landscapes in the Santa Clara Valley | Askevold, R. A. | 2005 | HEP | |
| Coyote Hills Wetland Enhancement and Drainage Improvement (Project Summary Outline) | Baker, R.; Ackerman, H.; Wolin, F.; DiDonato, J.; Kent, J.; Collins, J. N. | 2003 | WL | |
| Field Sampling Manual for the RMP for Trace Substances (version 1, January 1999) | Bell, D.; Gold, J.; Salop, P. | 1999 | HTML | RMP |
| The Historical Ecology of Contra Costa County: An Illustrated Preview and Guide | Beller, E. E.; Whipple, A.; Askevold, R. A.; Grossinger, R. M. | 2007 | HEP | |
| Streams, Wetlands, and Woodlands in the Napa Valley: New Perspectives from Old Maps | Beller, E. E.; Grossinger, R. M.; Askevold, R. A.; Pearce, S.; Collins, J. N.; McKee, L. J.; Hoenicke, R.; Gardner, S. | 2007 | HEP | |
| Report of the 2003 Program Review | Berger, R.; Conomos, J.; Herrgesell, P.; Mearns, A.; Schubel, J. R.; Weisberg, S. | 2004 | RMP | |
| New flame retardants detected in indoor and outdoor environments: New research suggests that a flame retardant marketed as a replacement for a banned and discontinued PBDE retardant can be found in peoples homes and the outdoor environment. | Betts, K. | 2008 | ||
| A Sediment Budget for Two Reaches of Alameda Creek | Bigelow, P.; Pearce, S.; McKee, L. J.; Gilbreath, A. N. | 2008 | WS | |
| San Francisco Bay Mercury Research Coordination Meeting February 23, 2005 Presentation- Survey of UCSC Mercury Work in and around San Francisco Bay. Hg complexation, salmonid uptake, algalblooms, fuel emissions... a whirlwind tour presented by Frank Black | Black, F.; Flegal, A. R; Conaway, C.; Leungen, A.; Langster, M. | 2005 | ||
| Aquatic Pesticides Alternatives Demonstration Project Report | Blankinship and Associates, Davis, CA; Contra Costa County Public Works Department, Martinez, CA; Marin Municipal Water District, Corte Madera, CA; Reclamation District 999, Clarksburg, CA; San Francisco Estuary Institute | 2004 | APMP | |
| Five-Year Program Review: Regional Monitoring Program for Trace Substances in the San Francisco Estuary | Boesch, D.; Cushman, R.; Crooks, W.; Mearns, A.; Metzger, S.; O'Connor, T.; Stewart-Oaten, A.; Bernstein, B.; O'Connor, J. | 1997 | HTML | RMP |
| Regulating Emerging Technologies in Silicon Valley and Beyond : Lessons Learned from 1981 Chemical Spills in the Electronics Industry and Implications for Regulating Nanotechnology | Bolam, V.; Davis, S.; Davison, A.; Ornelas, L.; Sanz, E.; Starkey, M.; Williams, M. | 2008 | Link | |
| River Otter Protocol | Breaux, A.; Zielinski, W.; Kucera, T. | 2002 | WL | |
| Land Use Timeline for Crow Canyon and the San Lorenzo Creek Watershed | Brewster, E.; Grossinger, R. M. | 2001 | HEP WS | |
| Summary of Suspended-Sediment Concentration Data, San Francisco Bay, California, Water Year 2000 | Buchanan, P. A.; Ganju, N. K. | 2002 | Link | RMP |
| A review of total dissolved copper and its chemical speciation in San Francisco Bay, California | Buck, K. N.; Ross, J. R. M; Flegal, A. R.; Bruland, K. W. | 2007 | RMP | |
| The colonial ascidian Didemnum sp. A: Current distribution, basic biology, and potential threat to marine communities of the northeast and west coasts of North America | Bullard, S. G.; Lambert, G.; Carman, M. R.; Byrnes, J.; Whitlatch, R. B.; Ruiz, G.; Miller, R. J.; Harris, L.; Valentine, P. C.; Collie, J. S.; Pederson, J.; McNaught, D. C.; Cohen, A. N.; Asch, R. G.; Dijkstra, J.; Heinonen, K. | 2007 | BI | |
| Phytoplankton and bacterial assemblages in ballast water of U.S. military ships as a function of port of origin, voyage time, and ocean exchange practices. | Burkholder, J. M.; Hallegraeff, G. M.; Melia, G.; Cohen, A. N.; Bowers, H. A.; Oldach, D. W.; Parrowa, M. W.; Sullivan, M. J.; Zimba, P. V.; Allen, E. H.; Mallin, M. A. | 2007 | BI | |
| San Francisco Bay Seafood Consumption Report | California Department of Health Services Environmental Health Investigations Branch; San Francisco Estuary Institute | 2001 | HTML PDF | RMP |
| Managing Contaminants of Emerging Concern in California:Developing Processes for Prioritizing, Monitoring, and Determining Thresholds of Concern | California Ocean Protection Council; California Ocean Science Trust; National Water Research Institute; San Francisco Estuary Institute; Southern California Coastal Water Research Project; University of California, Irvine Urban Water Research Center | 2009 | RMP | |
| Sediment Protocols | Callaway, J.; Stuart, S. | 2002 | WL | |
| Episodic global dispersal in shallow water marine organisms: The case history of the European shore crabs Carcinus maenas and Carcinus aestuarii | Carlton, J.; Cohen, A. N. | 2003 | BI | |
| Periwinkle's progress: the Atlantic snail Littorina saxatilis (Mollusca: Gastropoda) establishes a colony on a Pacific shore | Carlton, J.; Cohen, A. N. | 1998 | BI | |
| Biological Study Nonindigenous Aquatic Species in a United States Estuary: A Case Study of the Biological Invasions of the San Francisco Bay and Delta | Carlton, J.; Cohen, A. N. | 1995 | HTML | BI |
| Introduced Marine and Estuarine Invertebrates | Carlton, J. T.; Cohen, A. N.; J.T. Carlton | 2007 | HTML | BI |
| Patterns of Water-Quality Variability in San Francisco Bay During the First Six Years of the RMP, 1993-1998 | Cloern, J. E.; Cole, B. E.; Edmunds, J. L.; Schraga, T. S.; ArnsbergScripps, A. | 2000 | HTML PDF | RMP |
| Exotic Oyster Survey, Removal and Research in San Francisco Bay: Annual Progress Report | Cohen, A. N.; Weinstein, A. | 2008 | BI | |
| Shellfish Beds in Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay | Cohen, A. N.; Cosentino-Manning, N.; Schaeffer, K. | 2007 | Link | BI |
| Overview of 2004/05 Rapid Assessment Shore and Channel Surveys for Exotic Species in San Francisco Bay | Cohen, A. N. | 2005 | BI | |
| Rapid Assessment Shore Survey for Exotic Species in San Francisco Bay - May 2004 | Cohen, A. N.; Calder, D. R.; Carlton, J. T.; Chapman, J. W.; Harris, L. H.; Kitayama, T.; Lambert, C.C.; Lambert, G.; Piotrowski, C.; Shouse, M.; Solórzano, L. A. | 2005 | BI | |
| Rapid Assessment Channel Survey for Exotic Species in San Francisco Bay - November 2005 | Cohen, A. N.; Chapman, J. W. | 2005 | BI | |
| Rapid Assessment Survey for Exotic Organisms in Southern California Bays and Harbors, and Abundance in Port and Non-port Areas | Cohen, A. N.; Harris, L.; Bingham, B.; Carlton, J.; Chapman, J.; Lambert, C.; Lambert, G.; Ljubenkov, J. C.; Murray, S. N.; Rao, L. C.; Reardon, K.; Schwindt, E. | 2005 | BI | |
| The Panama Canal: Cutting a canal through Central America | Cohen, A. N.; S. Gollasch; B.S. Galil; A.N. Cohen | 2006 | Link | BI |
| The Panama Canal: Species Introductions and the Panama Canal | Cohen, A. N.; Gollasch, S.; Galil, B.S.; Cohen, A.N. | 2006 | Link | BI |
| Inspection for Live Marine Invertebrates in an Oyster Shell Pile at Drakes Bay Oyster Company | Cohen, A. N.; Zabin, C. J. | 2006 | BI | |
| Tanaidacea in The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. | Cohen, A. N.; J.T. Carlton | 2007 | HTML | BI |
| Potential Distribution of Zebra Mussels (Dreissena polymorpha) and Quagga Mussels (Dreissena bugensis) in California Phase 1 Report. A Report for the California Department of Fish and Game | Cohen, A. N. | 2007 | BI | |
| On Mitten Crabs and Lung Flukes | Cohen, A. N. | 2003 | BI | |
| Combating Bio-Invaders (radio program). NPR's Living on Earth (11-12-99) | Cohen, A. N. | 1999 | HTML | BI |
| Invasions status and policy on the U. S. west coast | Cohen, A. N. | 1999 | BI | |
| Briefing Paper on a Monitoring Plan for Nonindigenous Organisms in the San Francisco Bay/Delta Estuary | Cohen, A. N. | 1999 | BI | |
| Extent and impacts of ballast water invasions | Cohen, A. N. | 1999 | BI | |
| The regulation of biological pollution: Preventing exotic species invasions from ballast water discharged into California coastal waters | Cohen, A. N.; Foster, B. | 2000 | BI | |
| Invasions in the sea | Cohen, A. N. | 2004 | BI | |
| An Exotic Species Detection Program for Tillamook Bay | Cohen, A. N. | 2004 | BI | |
| An Exotic Species Detection Program for Puget Sound | Cohen, A. N. | 2004 | BI | |
| An Exotic Species Detection Program for the Lower Columbia River Estuary | Cohen, A. N. | 2004 | BI | |
| Summary of data and analyses indicating that exotic species have impaired the beneficial uses of certain California waters | Cohen, A. N.; Moyle, P. B. | 2004 | BI | |
| A review of Zebra Mussels' Environmental Requirements | Cohen, A. N.; CA Department of Water Resources | 2005 | BI | |
| An Introduction to the San Francisco Estuary | Cohen, A. N. | 2001 | BI | |
| Report of the Washington State Exotics Expedition 2000 | Cohen, A. N.; Berry, H.; Mills, C.; Milne, D.; Britton-Simmons, K.; Wonham, M.; Secord, D.; Barkas, J. A.; Bingham, B.; Bookheim, B.; Byers, J.; Chapman, J. W.; Cordell, J.; Dumbauld, B.; Fukuyama, A.; Harris, L. H.; Kohn, A.; Li, K.; Mumford, T.; Radashevsky, V.; Sewell, A.; Welch, K. | 2001 | BI | |
| Zebra Mussel's Calcium Threshold and Implications for its Potential Distribution in North America | Cohen, A. N.; Weinstein, A. | 2001 | BI | |
| Investigations into the Introduction of Non-indigenous Marine Organisms via the Cross-Continental Trade in Marine Baitworms | Cohen, A. N.; Weinstein, A.; Emmett, M. A.; Lau, W.; Carlton, J. | 2001 | BI | |
| The release of pest species by marine aquaculture: lessons from a South African parasite introduced into California waters | Cohen, A. N.; A.N. Cohen; S.K. Webb | 2002 | BI | |
| Success factors in the establishment of human-dispersed organisms | Cohen, A. N.; J M Bullock; R E Kenward; R S Hails | 2002 | BI | |
| Project Report for the Southern California Exotics Expedition 2000 A Rapid Assessment Survey of Exotic Species in Sheltered Coastal Waters | Cohen, A. N.; Harris, L. H.; Bingham, B. L.; Carlton, J. T.; Chapman, J. W.; Lambert, C. C.; Lambert, G.; Ljubenkov, J. C.; Murray, S. N.; Rao, L. C.; Reardon, K.; Schwindt, E. | 2002 | BI | |
| California's Response to the Zebra/Quagga Mussel Invasion in the West. Recommendations of the California Science Advisory Panel, for the California Incident Command (California Department of Fish and Game, California Department of Water Resources, U.S. Fish and Wildlife Service, California Department of Food and Agriculture, and California Department of Boating and Waterways) | Cohen, A. N.; Moll, R.; Carlton, J. T.; O'Neil, Jr.,C. R.; Anderson, L.; Moyle, P. B. | 2007 | BI | |
| Preventing the introduction of non-native species with imported oyster shell used for cultch in restoration projects: an inspection, and consideration of future protocols | Cohen, A. N.; Zabin, C. J. | 2007 | BI | |
| Weeding the garden | Cohen, A. N. | 1992 | BI | |
| Place Invaders | Cohen, A. N. | 1993 | BI | |
| Chinese mitten crabs in North America | Cohen, A. N. | 1995 | BI | |
| Intruders in the estuary | Cohen, A. N.; Carlton, J. T. | 1995 | BI | |
| Introduction, dispersal and potential impacts of the green crab Carcinus maenas in San Francisco Bay | Cohen, A. N.; Carlton, J. T.; Fountain, M. C. | 1995 | BI | |
| Have claw, will travel | Cohen, A. N. | 1997 | BI | |
| Biological invasions in the estuary | Cohen, A. N. | 1997 | BI | |
| Urging Action to control an abalone parasite and prevent other introductions via aquaculture activities. | Cohen, A. N.; et al.; Pete Wilson | 1997 | BI | |
| Transoceanic transport mechanisms: The introduction of the Chinese mitten crab Eriocheir sinensis to California | Cohen, A. N.; Carlton, J. | 1997 | BI | |
| Invasive Species in San Francisco Bay (radio program). NPR's Science Friday (1-23-98) | Cohen, A. N. | 1998 | HTML | BI |
| Exotic organisms; California's Emerging Environmental Challenges | Cohen, A. N. | 1998 | BI | |
| Ships' Ballast Water and the Introduction of Exotic Organisms into the San Francisco Estuary: Current Status of the Problem and Options for Management | Cohen, A. N. | 1998 | BI | |
| The exotic species threat to California's coastal resources | Cohen, A. N. | 1998 | BI | |
| Monitoring for Non-indigenous Organisms | Cohen, A. N. | 1998 | BI | |
| The invasion of the estuaries | Cohen, A. N.; Patten, K | 1997 | BI | |
| Biological invasions and opportunities for their regulation on the west coast of the United States. | Cohen, A. N.; Cassell, J. L.; Olin, P. G. | 1998 | BI | |
| The invasion of the Pacific Coast by the European green crab Carcinus maenas | Cohen, A. N.; Cassell, J. L.; Olin, P. G. | 1998 | BI | |
| Petition to list the seaweed Caulerpa taxifolia as a prohibited species under the Federal Noxious Weed Act | Cohen, A. N.; et al.; Bruce Babbit | 1998 | BI | |
| Accelerating invasion rate in a highly invaded estuary | Cohen, A. N.; Carlton, J. T. | 1998 | BI | |
| A Rapid Assessment Survey of Nonindigenous Species in the Shallow Waters of Puget Sound | Cohen, A. N.; Mills, C.; Berry, H.; Wonham, M.; Bingham, B.; Bookheim, B.; Carlton, J.; Chapman, J.; Cordell, J.; Harris, L.; Klinger, T.; Kohn, A.; Lambert, C. C.; Lambert, G.; Li, K.; Secord, D.; Toft, J. | 1998 | BI | |
| Biological Invasions in Aquatic Ecosystems: Impacts on Restoration and Potential for Control | Cohen, A. N.; Webb, S. K. | 1998 | BI | |
| Methods and Data for Analysis of Potential Distribution and Abundance of Zebra Mussels in California | Cohen, A. N.; Weinstein, A. | 1998 | BI | |
| The Potential Distribution and Abundance of Zebra Mussels in California | Cohen, A. N.; Weinstein, A. | 1998 | BI | |
| The Potential Distribution of Chinese Mitten Crabs (Eriocheir sinensis) in selected waters of the Western United States with U.S. Bureau of Reclamation Facilities | Cohen, A.N.; Weinstein, A. | 2001 | BI | |
| Red tide in Berkeley Marina raises concern for toxic blooms in Central Bay | Cole, B.; Cohen, A. N. | 1997 | WL | |
| Californias Statewide Survey Of Tidal Wetland Condition | Collins, J.; Sutula, M.; Williams, M.; Clark, R.; Roberts, C.; Stein, E.; Grosso, C.; Wiskind, A.; Solek, C.; May, M.; O' Connor, K.; Fetscher, E; Grenier, J .L.; Pearce, S.; Robinson, A.; Clark, C.; Rey, K.; Morrissette, S.; Eicher, A.; Pasquinelli, R.; Ritter, K.; Ross, J. | 2009 | WL | |
| Ecological Connections between Baylands and Uplands: Examples from Marin County | Collins, J.; Didonato, J.; Geupel, G.; Grenier, J. L.; Kucera, T.; Lidicker, B.; Rainey, B.; Rottenborn, S. | 2007 | WL HEP | |
| Comparison of Methods to Map California Riparian Areas | Collins, J.; Sutula, M.; Stein, E.; Odaya, M.; Zhang, E.; Larned, K. | 2006 | WL | |
| Second Annual Report Montezuma Wetlands Restoration Project Technical Review Team | Collins, J.; Grosso, C. S. | 2006 | WL | |
| Wildcat Creek 2001 Report | Collins, J. N; Collins, L. M.; Grossinger, R. M.; McKee, L. J.; Riley, A. | 2001 | HTML | WL |
| Developing Tools to Help Protect and Manage California Wetlands, Streams, and Riparian Resources | Collins, J. N.; Grenier, J. L.; Sutula, M. | 2008 | Link | WL |
| CRAM Evaluation of Wetland Conditions | Collins, J. N. | 2007 | WL | |
| Ambient Survey of Intertidal Ecological Health and Stressors | Collins, J. N.; Wittner, E.; Grosso, C. S.; Stralberg, D.; Sutula, M. | 2003 | WL | |
| Mosquito Landscapes - Part 1 (Transcript) | Collins, J. N. | 1999 | WL | |
| Evolution and Natural Maintenance of Tidal Marshes in San Pablo Bay (Transcript) | Collins, J. N. | 1999 | WL | |
| The Environment of the East Bay Shoreline When Europeans First Arrived (Transcript) | Collins, J. N. | 1999 | HEP WL | |
| Effects of the Goals Project (Transcript) | Collins, J. N. | 1999 | WL | |
| Elkhorn Slough Tidal Marsh Plan: Possible Lessons from the Bay Area Wetland Ecosystem Goals Project (PowerPoint presentation) | Collins, J. N. | 2004 | PPT | WL |
| Synthesis of Scientific Knowledge: for maintaining and improving functioning of the South Bay Ecosystem and Restoring Tidal Salt Marsh and Associated Habitats over the next 50 years at Pond and Pond-Complex Scales | Collins, J. N.; Grossinger, R. M. | 2004 | WL HEP | |
| First Annual Report of the Montezuma Wetlands Restoration Project Technical Review Team | Collins, J. N.; Grosso, C. S. | 2004 | WL | |
| Baylands Vegetation Mapping Protocol (Version 1.0) | Collins, J. N.; Stralberg, D. | 2004 | WL | |
| Data Collection Protocol Distribution, Abundance, and Treatment of Non-indigenous Speicies of Cordgrass in the San Francisco Estuary | Collins, J. N.; May, M.; Smith, D.; Klohr, S.; Zaremba, K. | 2002 | WL | |
| Coyote Hills Area Habitat Conceptual Planning for 2002-03 | Collins, J. N. | 2002-2003 | WL | |
| California Rapid Assessment Method (CRAM) - Part 1 | Collins, J. N. | 2003 | PPT | WL |
| Draft Guidelines for Developing the CRAM Metrics | Collins, J. N. | 2003 | WL | |
| South and Central Bay Wetlands Projects | Collins, J. N. | 2003 | WL | |
| Universal Wetland Ecological Features (Graphic) | Collins, J. N. | 2003 | WL | |
| California Rapid Assessment Method (CRAM) - Part 2 | Collins, J. N. | 2003 | PPT | WL |
| CRAM: Synopsis of first CRAM Core Team meeting | Collins, J. N. | 2003 | WL | |
| Bay Area Wetlands Ecosystem Goals Project: Bay Area Wetland Project Map | Collins, J. N.; Siegel, S.; Stralberg, D. | 2003 | WL | |
| Monitoring the US West Coast: An Assessment of Californias Estuaries and the Pacific Ocean:Spatial Hierarchy and its Rationale | Collins, J. N. | 2002 | WL | |
| California and the World Ocean 2002 (Abstract for Session on California Coastal Wetlands Issues) | Collins, J. N. | 2002 | WL | |
| Summary of Crissy Field Monitoring Elements | Collins, J. N. | 2002 | WL | |
| San Francisco Estuary Wetalnds Regional Monitoring Program Plan: Version 1, Framework and Protocols | Collins, J. N. | 2002 | WL | |
| Invasion of San Francisco Bay by Smooth Cordgrass, Spartina alterniflora: A Forecast of Geomorphic Effects on the Intertidal Zone | Collins, J. N. | 2002 | BI | |
| Crissy Field Monitoring Technical Review Team (Project Description) | Collins, J. N. | 2002 | WL | |
| Pacific Estuarine Ecosystem Indicators Research Consortium (PEEIR): Generalized Conceptual Models Wetlands Regional Monitoring Program | Collins, J. N. | 2002 | WL | |
| Executive Summary 2002 (Wetlands Science Program) | Collins, J. N. | 2002 | WL | |
| Geographic Scope of the Wetlands Science Program | Collins, J. N. | 2002 | WL | |
| Sustaining Regional Partnerships for Conservation: Sharing the Future | Collins, J. N. | PPT | WL | |
| Regional Wetlands Monitoring in San Francisco Bay (Transcript) | Collins, J. N. | WL | ||
| Regional Wetlands Monitoring in San Francisco Bay (Abstract) | Collins, J. N. | WL | ||
| A Very Brief Overview on The Histories of Some Marin County Creeks (Transcript) | Collins, J. N. | 1995 | WL | |
| Bay Area Wetlands Ecosystem Goals Project: Focus Team Orientation Talking Points | Collins, J. N. | 1995 | WL | |
| Bay Area Wetlands Ecosystem Goals Project: Starting Considerations | Collins, J. N. | 1995 | WL | |
| Bay Area Wetlands Ecosystem Goals Project: Focus Team Orientation Package | Collins, J. N.; Monroe, M.; Wilcox, C.; Olofson, P. | 1995 | WL | |
| What is a Tidal Marsh? | Collins, J. N. | 1996 | WL | |
| What are Data? (Transcript) | Collins, J. N. | 1996 | WL | |
| Geography of Wetlands in the San Francisco Estuary (Transcript) | Collins, J. N.; Grossinger, R. M.; Der, Z.; Brewster, E. | 1996 | WL | |
| Watershed Conference (Transcript) | Collins, J. N. | 1997 | WL | |
| Brief Overview of Historical Suisun Tidal Marsh Form and Ecological Function with Notes on Restoration Science (Transcript) | Collins, J. N. | 1997 | WL | |
| Watershed Management in the Bay Area (Transcript) | Collins, J. N. | 1997 | WS | |
| Bay Area Wetlands Ecosystem Goals Project: Key Baylands Species | Collins, J. N. | 1998 | WL | |
| Bay Area Wetlands Ecosystem Goals Project: Key Baylands Habitats | Collins, J. N. | 1998 | WL | |
| Mosquito Landscapes (Abstract) | Collins, J. N. | 1998 | WL | |
| The Baylands: Past, Present, and Change (Abstract) | Collins, J. N. | 1998 | WL | |
| Bay Area Wetlands Ecosystem Goals Project: Draft Functional Correspondence between Past and Present Key Habitats | Collins, J. N. | 1998 | WL | |
| The Watershed and the Baylands (Transcript) | Collins, J. N. | 1998 | WS | |
| Uncertainty in Biodiversity Planning: Lessons from the Bay Area (Transcript) | Collins, J. N. | 1998 | WL | |
| RMP Annual Meeting 1998 (Transcript) | Collins, J. N. | 1998 | RMP | |
| Comments on the Intersection of Land, Water, and People (Transcript) | Collins, J. N. | 1998 | WL | |
| B aylands Ecosystem Habitat Goals: Report on the Process to Set Regional Goals for Wetlands Restoration in the San Francisco Bay Area (Abstract) | Collins, J. N. | 1998 | WL | |
| Possible Geomorphic Effects of Invasive Spartina alterniflora in the San Francisco Estuary | Collins, J. N. | 2001 | PPT | WL |
| Estuarine Wetlands Restoration in the San Francisco Bay Area: the Roles of Not-for-Profits (Transcript) | Collins, J. N. | 2001 | WL | |
| Will Knowing Tidal Elevation Help Explain Variations in Sediment Chemistry and Microbial Processes Among Sample Plots in Tidal Marshes? | Collins, J. N. | 2001 | WL | |
| Restoration of the San Francisco Region: the Role of NGOs (Abstract) | Collins, J. N. | 2001 | WL | |
| An Overview of the Expected Physical Relationships between the Intertidal and Shallow Bay Zones of the San Francisco Estuary (Transcript) | Collins, J. N. | 2001 | WL | |
| Mosquito Landscapes - Part 2 (Transcript) | Collins, J. N. | 2001 | WL | |
| Historic Drainage Patterns of the Alameda Watershed (Transcript) | Collins, J. N. | 2001 | WS | |
| Pacific Estuarine Ecosystem Indicators Research Consortium (PEEIR): PEEIR Project Description | Collins, J. N. | 2001 | WL | |
| Final Draft Master List of NIS Plant Species | Collins, J. N. | 2001 | BI | |
| Program Strategy for the Wetlands Science Program | Collins, J. N. | 2001 | WL | |
| Coyote Hills Historic Baylands | Collins, J. N. | 2001 | PPT | WL |
| Bay Area Wetlands Regional Monitoring Program (Abstract, SOE 2001) | Collins, J. N.; Jones, P. | 2001 | WL | |
| Basic Regional Spatial Analysis of Non - Indigenous Invasive Species (NIS) Spartina Invasions in the San Francisco Estuary | Collins, J. N.; May, M. | 2001 | WL | |
| Executive Summary: SFEI Component of the Integrated Regional Wetlands Monitoring Pilot Project | Collins, J. N. | 2002 | WL | |
| Management Structure of the Wetlands Science Program | Collins, J. N. | 2002 | WL | |
| Major Technical Components of the Wetlands Science Program | Collins, J. N. | 2002 | WL | |
| Management Questions for the Wetlands Science Program | Collins, J. N. | 2002 | WL | |
| Mission Statement for the Wetlands Science Program | Collins, J. N. | 2002 | WL | |
| Program Development for the Wetlands Science Program | Collins, J. N. | 2002 | WL | |
| Montezuma Wetlands Monitoring Project Technical Review Team (TRT) First Information Package | Collins, J. N.; Grosso, C. S. | 2002 | WL | |
| Sediment Contaminants | Collins, J. N.; May, M.; Davis, J. A. | 2002 | WL | |
| San Francisco Bay Mercury Research Coordination Meeting February 23, 2005 Presentation- Cross-scale Exploration of Stressor-State Correlations EMAP Estuaries SF Bay Intensification Project | Collins, J. N.; Grosso, C. S.; Wittner, E. | 2005 | ||
| Monitoring the Water Quality Impacts of Wetland Restoration | Collins, J. N. | 2007 | PPT | RMP |
| A Bay Area Watersheds Science Approach (Abstract) | Collins, L. M.; Collins, J. N.; Hoenicke, R.; Grossinger, R. M. | 1998 | WS | |
| Decadal mercury trends in San Francisco Estuary sediments | Conaway, C. H.; Ross, J. R. M.; Looker, R.; Mason, R. P.; Flegal, A. R. | 2007 | RMP | |
| Mercury deposition in a tidal marsh downstream of the historic New Almaden mining district, CA | Conaway, C. H.; Watson, E. B.; Flanders, J. R.; Flegal, A. R. | 2003 | PPT | RMP |
| Water Quality Improvements are Critical to Waterfront Devleopment: Lessons from Boston, San Francisco and Kitakyushu | Connor, M. | 2006 | CMR | |
| Water Quality Improvements Are Critical to Waterfront Development: Lessons from Boston, San Francisco and Kitakyushu | Connor, M. | 2005 | CMR | |
| Legacy Pesticides in San Francisco Bay Conceptual Model/Impairment Assessment | Connor, M.; Davis, J. A.; Leatherbarrow, J.; Werme, C. | 2004 | CMR | |
| Dioxins in San Francisco Bay: Conceptual Model/Impairment Assessment | Connor, M.; Yee, D.; Davis, J. A.; Werme, C. | 2004 | CMR | |
| Conceptual Modeling of the Major Factors Controlling the Sources, Fate, and Effects of Persistent Organic Pollutants in the Estuary | Connor, M.; Davis, J. A.; Leatherbarrow, J.; Yee, D.; Oros, D.; Ross, J. R. M.; Werme, C. | 2003 | CMR | |
| The slow recovery of the San Francisco Estuary from the legacy of organochlorine pesticides | Connor, M. S.; Davis, J. A.; Leatherbarrow, J.; Greenfield, B. K.; Gunther, A.; Hardin, D.; Mumley, T.; Werme, C.; Oram, J. J. | 2007 | RMP | |
| The Role of Sedimentation in Estuarine Marsh Development within the San Francisco Estuary, California, USA | Culberson, S. D.; Foin, T. C.; Collins, J. | 2004 | Link | |
| Sediment Contamination in San Leandro Bay, CA | Daum, T.; Toia, R.; Fairey, R.; Anderson, J.; Jones, J. | 2000 | RMP | |
| RMP Watershed Pilot Study: An Information Review with Emphasis on Contaminant Loading, Sources, and Effects | Daum,T.; Hoenicke, R. | 1998 | HTML PDF | RMP |
| Green Infill for Clean Stormwater | David, N.; McKee, L .J.; Krebs, Jennifer | 2009 | WS | |
| Mercury Concentrations and Loads in a Large River System Tributary to San Francisco Bay, California, USA | David, N.; McKee, L .J.; Black, F. J.; Flegal, A. R; Conaway, C. H.; Schoelhamer, D. H.; Ganju, N. K. | 2009 | WS | |
| Going Organic Project | David, N.; McKee, L .J. | 2009 | WS | |
| Comparison of Agricultural Runoff between Organic Farming and Conventional Chemical Farming | David, N. | 2009 | WS | |
| Best Management Practices in Stone Fruit Project | David, N. | 2009 | WS | |
| Sustainable Cotton Project | David, N. | 2009 | WS | |
| Field Sampling Manual for the Regional Monitoring Program for Trace Substances | David, N.; Bell, D.; Gold, J. | 2001 | RMP | |
| Surveillance Monitoring in the RMP | David, N.; Oros, D.; Risebrough, R. | 2002 | PPT | RMP |
| Non-Chemical Aquatic Plant Control (presented at NorCAl SETAC 2003 Conference) | David, N.; Greenfield, B. K.; Siemering, G. | 2003 | PPT | APMP |
| Aquatic Pesticides Alternatives Literature Review, Review of Alternative Aquatic Pest Control Methods For California Waters | David, N.; Greenfield, B. K.; Hunt, J.; Siemering, G.; Wittmann, M. | 2004 | APMP | |
| Control of Agricultural Drainage Water and Restoration of Wetland Water Supply Channels | David, N.; Eacock, C.; McGahan, J.; Beckon, W. | 2005 | CMR | |
| Mercury transport to San Francisco Bay through the Sacramento-San Joaquin River Delta | David, N.; McKee, L. J.; Leatherbarrow, J. | 2005 | RMP | |
| Evaluating impacts of Lake Maid plant control | David, N.; Greenfield, B. K.; Siemering, G. S. | 2006 | APMP | |
| Riverine Transport of Sediment and Mercury to North San Francisco Bay | David, N.; McKee, L. J.; Leatherbarrow, J. | 2006 | RMP | |
| Comparison of Agricultural Run-off between Biological Farming and Conventional Chemical Farming | David, N.; Thomas, F.; Gibbs, M. | 2007 | WS | |
| Comparison o Agricultural Run-off between Biological Farming and Conventional Chemical Farming | David, N.; Thomas, F.; Gibbs, M. | 2007 | WS | |
| Agricultural Drainage through the Grassland Bypass Project | David, N.; Eacock, M. C. S.; McGahan, J. C.; Beckon, W. N. | 2008 | ||
| Contamination Concentrations in Fish from San Francisco Bay, 2003 | Davis, J.; Hunt, J.; Greenfield, B. K.; Fairey, R.; Sigala, M.; Crane, D.; Regalado, K.; Bonnema, A. | 2006 | RMP | |
| Mercury in sport fish from the Sacramento-San Joaquin Delta region, California | Davis, J. A.; Greenfield, B. K.; Ichikawa, G.; Stephenson, M. | 2008 | CMR | |
| SWAMP Fact Sheet: Long-Term Monitoring of Pollutants in Fish and Mussels Documents Major Improvements and Persistent Problems | Davis, J. A. | 2008 | CMR | |
| The San Francisco Bay Seafood Consumption Study Report | Davis, J. A. | 2001 | HTML | RMP |
| Technical Report of the Sources, Pathways, and Loadings Workgroup | Davis, J. A.; Abu-Saba, K.; Gunther, A. J. | 2001 | PDF PDF | RMP |
| NorCal SEATAC 2001 - Seafood Contamination and Consumption | Davis, J. A.; Greenfield, B. K.; Roberts, C.; Fairey, R.; Ichicawa, G.; Stephenson, M.; Crane, D. | 2001 | PPT | CMR |
| Water Quality in San Francisco Bay | Davis, J. A. | 2002 | PPT | RMP |
| New Directions for the RMP: An Overview | Davis, J. A. | 2002 | PPT | RMP |
| The long term fate of PCBs in San Francisco Bay | Davis, J. A. | 2002 | PPT | RMP |
| The Long-Term Fate of PCBs in San Francisco Bay | Davis, J. A. | 2003 | PDF PPT | RMP |
| Choosing a Future Bay: The Long - Term Fate of PCBs and Other Organics | Davis, J. A.; Greenfield, B. K.; Leatherbarrow, J.; David, N. | 2003 | PPT | RMP |
| Persistent Toxic Chemicals of Human Health Concern in Fish from San Francisco Bay and the Sacramento River, CA | Davis, J. A.; May, M. D.; Wainwright, S. E.; Fairey, R.; Roberts, C.; Ichikawa, G.; Tjeerdema, R.; Stoelting, M.; Becker, J.; Petreas, M.; Mok, M.; McKinney, M.; Taberski, K. | 2003 | HTML | RMP |
| Potential for increased mercury accumulation in the Estuary food web: Issues in San Francisco Estuary Tidal Wetlands Restoration | Davis, J. A.; Yee, D.; Collins, J. N.; Schwarzbach, S. E.; Luoma, S. N. | 2003 | Link | RMP |
| Contaminants Concentrations in Fish from San Francisco Bay, 1997 | Davis, J. A.; May, M. D.; Wainwright, S. E.; Fairey, R.; Roberts, C.; Ichikawa, G.; Tjeerdema, R.; Stoelting, M.; Becker, J.; Petreas, M.; Mok, M.; McKinney, M.; Taberski, K. | 1999 | HTML PDF | RMP |
| Technical Report of the Chlorinated Hydrocarbon Workgroup | Davis, J. A.; Yoon, J. | 1999 | HTML PDF | RMP |
| Contaminant Concentrations in Fish: 2000 (2002 RMP Annual Meeting) | Davis, J. A.; Greenfield, B. K. | 2000 | PDF PPT | RMP |
| Contaminant Concentrations in Fish from the Sacramento - San Joaquin Delta and Lower San Joaquin River, 1998 | Davis, J. A.; May, M.; Ichikawa, G.; Crane, D. | 2000 | RMP | |
| Contaminant Loads from Stormwater to Coastal Waters in the San Francisco Bay Region: Comparison to Other Pathways and Recommended Approach for Future Evaluation | Davis, J. A.; McKee, L. J.; Leatherbarrow, J. E.; Daum, T. | 2000 | HTML PDF | CMR |
| Inventory of Priority Datasets Relating to the San Francisco Estuary | Davis, J. A. | 1988 | AHI | |
| San Francisco Estuary Project Status and Trends Report on Pollutants in the San Francisco Estuary, Final Draft | Davis, J. A.; Gunther, A.; Richardson, B. J.; O'Connor, J.; Spies, R. B.; Wyatt, E.; Larson, E.; Meiorin, E. C. | 1991 | AHI | |
| Bioaccumulation of Contaminants by Transplanted Bivalves in the San Francisco Estuary: Status and Trends | Davis, J. A.; Haskins, J.; Hoenicke, R.; Thompson, B. | 1996 | HTML | CMR |
| Contaminant Concentrations in Fish from San Francisco Bay, 1997 | Davis, J. A.; May, M. D.; Wainwright, S. E.; Fairey, R.; Roberts, C.; Ichikawa, G.; Tjeerdema, R.; Stoelting, M.; Becker, J.; Petreas, M.; Mok, M.; McKinney, M.; Taberski, K. | 1997 | HTML PDF | RMP |
| The Long-Term Fate of PCBs in San Francisco Bay | Davis, J. A. | 2004 | Link | RMP |
| 2004 RMP Program Plan | Davis, J. A. | 2004 | RMP | |
| Sport fish contamination in the Bay-Delta watershed | Davis, J. A.; Greenfield, B. K. | 2004 | CMR | |
| Fish mercury in the Bay-Delta watershed: a dark cloud with a silver lining | Davis, J. A.; Greenfield, B. K.; Ichikawa, G.; Stephenson, M. | 2004 | CMR | |
| Cisnet Technical Report: Contaminant Accumulation In Eggs of Double-Crested Cormorants and Song Sparrows In San Pablo Bay | Davis, J. A.; Greenfield, B. K.; Ross, J. R. M.; Crane, D.; Ichikawa, G.; Negrey, J.; Spautz, H.; Nur, N. | 2004 | RMP | |
| Regional Monitoring Program for Trace Substances in the San Francisco Estuary 2005 Program Plan | Davis, J. A. | 2005 | RMP | |
| Monitoring Legacy and Emerging Pollutants at the Top of the San Francisco Bay Food Web | Davis, J. A. | 2005 | HTML | RMP |
| Pulse of the Estuary 2005: Monitoring and Managing Water Quality in the San Francisco Estuary | Davis, J. A.; Grenier, J. L.; Grossinger, R. | 2005 | RMP | |
| Mercury Monitoring in California Sport Fish : A Historical Review and Recommendations for the Future | Davis, J. A.; Grenier, J. L.; Melwani, A. R.; Bezalel, S.; Hunt, J. A.; Ujihara, A.; Brodberg, R. | 2006 | ||
| Pulse of the Estuary: Monitoring and Managing Water Quality in the San Francisco Estuary | Davis, J. A.; et.al.; Jay Davis | 2006 | RMP | |
| The Regional Monitoring Program: Science in Support of Managing Water Quality in San Francisco Bay | Davis, J. A.; Taberski, K.; Buchan, K.; Tucker, D.; Flegal, A. R.; Gunther, A. J. | 2006 | RMP | |
| The State of San Francisco Bay: Water Quality | Davis, J. A.; Connor, M. S.; Flegal, A. R. | 2007 | PPT | RMP |
| Polychlorinated biphenyls (PCBs) in San Francisco Bay | Davis, J. A.; Hetzel, F.; Oram, J. J.; McKee, L. J. | 2007 | RMP | |
| Recommendations for a Bioaccumulation Monitoring and Human Health Risk Reduction Program for California | Davis, J. A. | 2008 | CMR | |
| Contaminants in Sport Fish of California lakes and reservoirs | Davis, J.A.; Melwani, A.R.; Bezalel, S.N.; Hunt, J.A.; Ichikawa, G.; Bonnema, A.; Lamerdin, C.; Heim, W.; Crane, D.; Stephenson, M. | 2008 | ||
| Bioaccumulation Of Pollutants In California Waters: A Review Of Historic Data And Assessment Of Impacts On Fishing And Aquatic Life | Davis, J.A.; Grenier, J. L.; Melwani, A. R.; Bezalel, S. N.; Letteney, E. M.; Zhang, E. J.; Odaya, M. | 2008 | Link Link | CMR |
| NorCal SEATAC 2001 - Seafood Contamination and Consumption | Davis, J.A.; Taberski, K. | 2002 | PPT | RMP |
| Monitoring Water Quality in San Francisco Bay: Lessons Learned After Ten Years of Regional Monitoring | Davis, J.A.; Taberski, K. | 2003 | PPT | RMP |
| Cisnet Technical Report: Contaminant Accumulation in Forage Fish | Davis, J.A.; Ross, J. R. M.; Fairey, R.; Roberts, C.; Ichikawa, G.; Negrey, J.; Crane, D. | 2004 | RMP | |
| Resurrection (Article in New Scientist) | DeWeerdt, S. | 2001 | HEP | |
| Choosing the Best Map: Availability, Accuracy, and Accountability (Abstract) | Der, Z.; Grossinger, R. M.; Wong, C.; Collins, J. N. | 2005 | WL | |
| San Francisco Bay Mercury Research Coordination Meeting February 23, 2005 Presentation- Hg Fate and Transport Within the San Jose/Santa Clara WPCP: Study Design and Preliminary Results presented by James Downing | Downing, J. | 2005 | ||
| Water Quality Science and Management in the Delaware Estuary | Fikslin, T. | 2008 | PPT | RMP |
| Sources, transport, fate and toxicity of pollutants in the San Francisco Bay estuary | Flegal, A. R.; Davis, J. A.; Connor, M. S.; Conaway, C. H. | 2007 | RMP | |
| Spatial and temporal variations in silver contamination and toxicity in San Francisco Bay | Flegal, A. R.; Brown, C. L.; Squire, S.; Ross, J. R. M.; Scelfo, G. M.; Hibdon, S. | 2007 | RMP | |
| A Review of Factors Influencing Measurements of Decadal Variations in Metal Contamination in San Francisco Bay, California | Flegal, R.; Conaway, C.; Scelfo, G.; Hibdon, S.; Sanudo-Wilhelmy, S. | 2005 | RMP | |
| UC Santa Barbara Graduate Project Report: "A Cost and Environmental Analysis of Aquatic Plant Management in California" | Frieman, G. M.; Lehman, G. V.; Quinn, J. D.; Wittmann, M. E. | 2004 | PDF HTML | APMP |
| Flamenco + Geo: extending a search interface based on hierarchical faceted metadata with geographic capabilities | Frontiera, P. | 2008 | Link | |
| Flamenco + Geo: extending a search interface based on hierarchical faceted metadata | Frontiera, P. | 2008 | ||
| Tidal wetland restoration potential using dredged sediments: a methodology for assessment with examples from the North Bay Area | Gahagan & Bryant Associates; San Francisco Estuary Institute | 1996 | WL | |
| Pathogen Occurrence and Analysis in Relation to Water Quality Attainment in San Francisco Bay Area Watersheds | Glasner, A.; McKee, L. J. | 2002 | WS | |
| PCB Movement through the Food-Web of San Francisco Bay: Development of a Model (2003 RMP Annual Meeting) | Gobas, F.; Wilcockson, J. | 2003 | PPT | RMP |
| San Francisco Bay PCB Food - Web Model | Gobas, F.; Wilcockson, F. | 2003 | RMP | |
| Dredging and Sediment Management in San Francisco Bay | Goldbeck, S. | 2008 | PPT | RMP |
| Bridging Divides: Maritime Canals as Invasion Corridors | Gollasch, S.; Galil, B. S.; Cohen, A. N. | 2006 | Link | BI |
| Grassland Bypass Project Report 2004-2005 | Grassland Bypass Project Oversight Committee | 2008 | CMR | |
| Grassland Bypass Project Report 2003 | Grassland Bypass Project Oversight Committee | 2005 | CMR | |
| Mercury In Biosentinel Forage Fish In San Francisco Bay | Greenfield, B. K.; Jahn, A. | 2009 | RMP | |
| APMP Alternatives Program Executive Summary | Greenfield, B. K. | 2004 | APMP | |
| Aquatic Pesticides Alternatives Executive Summary | Greenfield, B. K. | 2004 | APMP | |
| APMP Alternatives Program Executive Summary | Greenfield, B. K. | 2004 | APMP CMR | |
| Review of Alternative Aquatic Pest Control For California Waters | Greenfield, B. K.; David, N.; Hunt, J.; Wittmann, M.; Siemering, G. | 2004 | APMP | |
| Review of Alternative Aquatic Pest Control Methods For California Waters | Greenfield, B. K.; David, N.; Hunt, J.; Wittmann, M.; Siemering, G. | 2004 | APMP | |
| Review of Alternative Aquatic Pest Control Methods For California Waters | Greenfield, B. K.; David, N.; Hunt, J.; Wittmann, M.; Siemering, G. | 2004 | APMP CMR | |
| A PAH Fate Model for San Francisco Bay | Greenfield, B. K.; Davis, J. A. | 2004 | RMP | |
| A Simple Mass Balance Model for PAH Fate in the San Francisco Estuary | Greenfield, B. K.; Davis, J. A. | 2004 | RMP | |
| Seasonal, Interannual, and Long-term Variation in sport fish contamination, San Francisco Bay | Greenfield, B. K.; Davis, J. A.; Fairey, R.; Roberts, C.; Crane, D.; Ichikawa, G. | 2004 | Link PDF | RMP |
| Mercury Contamination of Sport Fish in the Delta and its Tributaries | Greenfield, B. K.; Davis, J. A.; Ichikawa, G.; Stephenson, M.; Slotton, D. G.; Ayers, S.; Jarman, W. | 2004 | RMP | |
| Contaminant concentrations in Delta fish | Greenfield, B. K. | 2001 | RMP | |
| Stable isotopes may help explain fish contamination patterns in the Estuary | Greenfield, B. K. | 2002 | RMP | |
| Contaminant concentrations in fish: 2000 (Oral Presentation) | Greenfield, B. K.; Davis, J. A. | 2002 | PDF PPT | RMP |
| Contaminant concentrations in fish: 2000 | Greenfield, B. K.; Davis, J. A. | 2002 | RMP | |
| Shell damage and salt marsh periwinkles (Littoraria irrorata Say) and resistance to future attacks by blue crabs (Callinectes sapidus Rathbun) | Greenfield, B. K.; Lewis, D. B.; Hinke, J. T. | 2002 | PDF PDF | WL |
| Contaminant Concentrations in Fish from San Francisco Bay, 2000 | Greenfield, B. K.; Davis, J. A.; Fairey, R.; Roberts, C.; Crane, D.B.; Ichicawa, G.; Petreas, M. | 2000 | HTML PDF | RMP |
| Predicting mercury levels in fish: use of water chemistry, trophic ecology, and spatial traits | Greenfield, B. K.; Hrabik, T. R.; Harvey, C. J.; Carpenter, S. R. | 2000 | RMP | |
| Monitoring Trace Organic Contamination in Central Valley Fish: Current Data and Future Steps. | Greenfield, B. K.; Wittner, E.; David, N.; Shonkoff, S. B.; Davis, J. A. | 2004 | CMR | |
| Aquatic Pesticides Monitoring Program Nonchemical Alternatives Year 3 Final Report | Greenfield, B. K.; David, N.; Siemering, G.; McNabb, T. P.; Spencer, D. F.; Ksander, G. G.; Donovan, M. J.; Liow, P. S.; Chan, W. K.; Shonkoff, S. B.; Andrews, S.; Howard, V.; Sytsma, M. | 2005 | APMP | |
| Control costs, operation, and permitting issues for non-chemical plant control: case studies in the San Francisco Bay-Delta Region, California. | Greenfield, B. K.; Blankinship, M.; McNabb, T. P. | 2006 | APMP | |
| Mercury in biosentinel fish in San Francisco Bay: First-year project report | Greenfield, B. K.; Jahn, A.; Grenier, J. L.; Shonkoff, S.; Sandheinrich, M. | 2006 | RMP | |
| Mechanical shredding of water hyacinth (Eichhornia crassipes): Impacts to water quality in the Sacramento-San Joaquin River Delta, California | Greenfield, B. K.; Siemering, G.; Andrews, J. C.; Rajan, M.; Andrews Jr., S. P.; Spencer, D. F. | 2007 | APMP CMR | |
| Modeling mercury bioaccumulation in largemouth bass in the Sacramento-San Joaquin River Delta and tributaries | Greenfield, B. K.; Slotton, D. G; Ayers, S. M. | 2007 | CMR | |
| The RMP Mercury Strategy: Studies Underway | Greenfield, B. K. | 2008 | PPT | RMP |
| Modeling mercury accumulation in largemouth bass | Greenfield, B. K.; Lent, M. A.; Slotton, D. G.; Ayers, S. M. | 2008 | CMR | |
| A new research program on non-chemical pest control in California waters | Greenfield, B. K.; David, N.; Siemering, G. | 2003 | APMP CMR | |
| A mass balance model for the fate of PAHs in the San Francisco Estuary | Greenfield, B. K.; Davis, J. A. | 2003 | PPT | RMP |
| Contaminant Concentrations in Fish from San Francisco Bay, 2000 | Greenfield, B. K.; Davis, J. A.; Fairey, R.; Roberts, C.; Crane, D. B.; Ichikawa, G.; Petreas, M. | 2003 | HTML PDF | RMP |
| An Integrated Wetlands Assessment Program for the San Francisco Bay Area and California | Grenier, J. L.; Featherston T.; Grosso, C. S.; Larned, K.; May, M.; Hoenicke, R.; Collins, J.; Clark, R.; Breaux A.; Potter, C.; Wheetly, M.; Stein, E.; Sutula, M.; Fetscher, B. | 2005 | HTML | WL |
| The tidal marsh food web | Grenier, J. L.; Collins, J.; Davis, J. A.; Greenfield, B. K. | 2002 | CMR WL | |
| San Francisco Bay Mercury Research Coordination Meeting February 23, 2005 Presentation- Mercury TMDL in the Guadalupe River Watershed | Grieb, T. | 2005 | ||
| Re-Oaking the Valleys: Bringing Native Trees Back into Californias Suburban Landscapes | Grossinger, R. M.; Whipple, A. | 2009 | HEP | |
| Historical Ecology of South Santa Clara County: Preliminary Findings. A Technical Memorandum to the Santa Clara Valley Habitat Conservation Plan/Natural Community Conservation Plan | Grossinger, R. M.; Striplen. C. J.; Askevold, R. A.; Beller, E. E.; Salomon, M. | 2007 | HEP | |
| Historical landscape ecology of an urbanized California valley: wetlands and woodlands in the Santa Clara Valley | Grossinger, R. M.; Striplen, C. J.; Askevold, R. A.; Brewster, E.; Beller, E. E. | 2007 | HEP | |
| South Santa Clara Valley Historical Ecology Study, including Soap Lake, the Upper Pajaro River, and Llagas, Uvas-Carnadero, and Pacheco Creeks | Grossinger, R. M.; Beller, E. E.; Salomon, M.; Whipple, A.; Askevold, R. A.; Striplen. C. J.; Brewster, E.; Leidy, R. A. | 2008 | HTML HTML | HEP |
| The Historical Ecology of Napa Valley: An Introduction | Grossinger, R. M.; Beller, E. E.; Collins, J. N.; Gardner, S. | 2008 | HEP | |
| Landscape History of the Trancas: Historical Ecology Reseach Summary for the Trancas Crossing Park and Napa River Trail | Grossinger, R. M.; Beller, E. E. | 2007 | HEP | |
| Introduced Tidal Marsh Plants in the San Francisco Estuary: Regional Distribution and Priorities for Control | Grossinger, R. M.; Alexander, J.; Cohen, A. N.; Collins, J. T. | 1998 | BI | |
| Assessing Ecological Potential in an Urbanized Coastal Ecosystem: Methods and Findings from Historical Research in the San Francisco Bay Area (Abstract for Southern California Wetlands Recovery Project Conference 2002) | Grossinger, R. M. | 2002 | HEP | |
| Sonoma Valley Historical Ecology Project, Phase 1 Final Report | Grossinger, R. M.; Dawson, A. | 2002 | HEP | |
| Physical and Ecological Characteristics of the Historic Baylands of South San Francisco Bay (Poster for the 2003 State of the Estuary Conference) | Grossinger, R. M.; Collins, J. N.; Striplen. C. J.; Burns, T.; Brewster, E.; Richard, C.; Strode, E. | 2003 | HEP WL | |
| Landscape Change in the Napa River Watershed, 1800 - 2002: Implications for the Restoration of In - Stream, Floodplain, and Valley Floor Habitat | Grossinger, R. M.; Striplen. C. J.; Brewster, E.; Collins, L. | 2003 | PPT | HEP |
| What did this place used to look like, anyway? An Example of Historical Ecology Research from the San Francisco Bay Area, CA (Abstract for Society for Ecological Restoration Conference 1999) | Grossinger, R. M.; Brewster, E.; Collins, J. N.; Der, Z. | 1999 | HEP | |
| The Way It Was: Mythology, Memory, and Maps of the Early San Francisco Bay Area (Abstract for American Society for Environmental History Conference, March 2000) | Grossinger, R. M. | 2000 | HEP | |
| Geography Department Commencement Ceremonies, UC Berkeley, Keynote Address, May 2004: "Notes from Places Past and Future" | Grossinger, R. M. | 2004 | HTML PDF | HEP |
| Once and Future Bay: Lessons from History for Revitalizing the Bay | Grossinger, R. M.; Baye, P. | 2004 | HEP | |
| Ecological, Geomorphic, and Land Use History of Carneros Creek Watershed: A component of the watershed management plan for the Carneros Creek watershed, Napa County, California | Grossinger, R. M.; Striplen. C. J.; Brewster, E.; McKee, L. J. | 2004 | HEP WS | |
| Ecological, Geomorphic, and Land Use History of Sulphur Creek Watershed: A component of the watershed management plan for the Sulphur Creek watershed, Napa County, California. | Grossinger, R. M.; Striplen. C. J.; McKee, L. J.; Brewster, E. | 2004 | HEP WS | |
| Documenting Local Landscape Change: The Bay Area Historical Ecology Project | Grossinger, R. M.; Egan, D.; Howell, E. A. | 2005 | HTML | HEP |
| Historical Ecology at SFEI: Presentation to the SFEI Board of Directors | Grossinger, R. M. | 2003 | HEP | |
| A Geographic History of the San Lorenzo Creek Watershed: Landscape Patterns Underlying Human Activities (w / 8.5x11 or 11 x 17 map) | Grossinger, R. M.; Brewster, E. | 2003 | PDF PDF | HEP WS |
| Baylands and Creeks of South San Francisco Bay | Grossinger, R. M.; Askevold, R. A. | 2005 | HEP | |
| T-Sheet User Guide: Application of the Historical U.S. Coast Survey Maps to Environmental Management in the San Francisco Bay Area | Grossinger, R. M.; Askevold, R. A.; Collins, J. N. | 2005 | HEP | |
| State of the Estuary 2005 Conference Abstract | Grossinger, R. M.; Askevold, R. A.; Richard, C. | 2005 | HEP | |
| Changing Delta Geometry and Ecology: The Effects of Historical Landscape Modification on Water Quality and Ecosystem Structure in Suisun Marsh and Delta | Grossinger, R. M.; Collins, J. N.; Enright, C.; Culberson, S.; Mueller-Solger, A. | 2005 | HEP | |
| Coyote Creek Watershed Historical Ecology Study: Historical Conditions and Landscape Change in the Estern Santa Clara Valley, California | Grossinger, R. M.; Askevold, R. A.; Striplen. C. J.; Brewster, E.; Pearce, S.; Larned, K.; McKee, L. J.; Collins, J. N. | 2006 | HTML | HEP |
| Environmental Data Upload and Visualization Tools | Grosso, C.; Bezalel, S.; Oram, J. J.; Featherston, T.; Ross, J.; Sedlak, M.; Franz, A.; Lowe, S.; Yee, D. | 2009 | RMP | |
| Exchange and Integration of Monitoring Data to Address Management Questions at Multiple Scales | Grosso, C. S.; Ross, J. R. M.; Lowe, S. | 2008 | Link PDF | RMP |
| Environmental Data Management Evaluating Internal Performance | Grosso, C. S.; Ross, J. R. M.; Lowe, S.; Yee, D.; Franz, A.; Stevanovic, P. | 2007 | RMP | |
| Facilitating the Exchange and Reporting of Monitoring Data | Grosso, C. S.; Ross, J. R. M.; Lowe, S.; Yee, D.; Franz, A.; Stevanovic, P. | 2005 | HTML | RMP |
| Copper and Nickel Impairment Assessment (2002 RMP Annual Meeting) | Grovhoug, T.; Hall, T.; Olivieri, E.; Walker, L. | 2002 | PPT | RMP |
| An Assessment of The Loading of Toxic Contaminants to The San Francisco-Bay Delta: Executive Summary | Gunther, A.; Davis, J. A.; Phillips, D. J. H. | 1987 | AHI | |
| An Assessment of The Loading of Toxic Contaminants to The San Francisco-Bay Delta: Full Report | Gunther, A.; Davis, J. A.; Phillips, D. J. H. | 1987 | AHI | |
| Benefits of the RMP and Challenges for the Future: Scientific Community Perspective | Gunther, A. J. | 2003 | PPT | RMP |
| The Bioavailability of Toxic Contaminants in the San Francisco Bay-Delta - Proceedings of a Two Day Seminar Series | Gunther, A. J.; San Francisco Estuary Institute; AHI | 1989 | CMR | |
| Optimizing Transplanted Bivalve Studies for the Regional Monitorig Program for Trace Substances | Hardin, D.; Salop, P.; Bemis, B.; Applied Marine Sciences | 2005 | RMP | |
| Pharmaceuticals and Personal Care Products in Wastewater Treatment Plant Influent and Effluent and Surface Waters of Lower South San Francisco Bay | Harrold, K. H.; Yee, D.; Sedlak, M.; Klosterhaus, S.; Davis, J. A.; Woudneh, M.; Riley, P. | 2009 | RMP | |
| San Francisco Estuary National Water Quality Monitoring Network Pilot Study Report | Harrold, K. H.; Lowe, S.; Connor, M.; Williams, M.; Kerkering, H.; Farrarr, C.; Eagles-Smith, C | 2008 | RMP | |
| Aquatic Pesticides Monitoring Program Phase 3 (2005) Bioassessment of Waterbodies Treated With Aquatic Pesticides | Hayworth, J.; Melwani, A. R. | 2005 | APMP | |
| Phase 2 (2003) Bioassessment of Waterbodies Treated with Aquatic Pesticides | Hayworth, J.; David, N.; Shonkoff, S. B. | 2004 | APMP | |
| A Proposed Lentic Benthic Bioassessment Procedure for California (Protocol Brief for Biological Sampling in Lakes, Reservoirs, and Ponds) | Hayworth, J. | 2004 | APMP | |
| Historical Ecology of Lower San Francisquito Creek Phase 1 | Hermstad, D.; Cayce, K.; Grossinger, R. M. | 2009 | HEP | |
| PCBs Total Maximum Daily Loads, San Francisco Bay | Hetzel, F. | 2003 | PPT | RMP |
| Science Support for the Surface Water Ambient Monitoring Program, SWRCB Agreement No. 03-200-250-0 | Hoenicke, R.; Lowe, S.; Davis, J. A. | 2008 | CMR | |
| Setting Goals and Defining Watershed and Stream "Health" to Better Integrate Policies, Programs, and Projects | Hoenicke, R.; Collins, J. N. | 2008 | WS | |
| A Watershed Monitoring Strategy for Napa County | Hoenicke, R.; Hayworth, J. | 2005 | WS | |
| Aligning Socio-Economic and Ecological Condition Valuation | Hoenicke, R.; Collins, J. N. | 2007 | WS | |
| Adapting an ambient monitoring program to the challenge of managing emerging pollutants in the San Francisco estuary | Hoenicke, R.; Oros, D. R.; Oram, J. J.; Taberski, K. M. | 2007 | RMP | |
| Ballast Water Discharge Standards: Report and Recommendation of the California Advisory Panel on Ballast Water Performance Standards. | Holmes, M.; Bolland, D.; Cohen, A. N.; Fox, A.; Herod, J.; Jennings, W.; Moore, S.; Newkirk, S.; Ruiz, G.; Simkanin, C.; Talley, D.; Ward, K. | 2005 | BI | |
| Does shredding water hyacinths affect mercury speciation? | Hua, M.; Rajan, M.; Hackett, A.; Darrow, J.; Andrews, J. C.; Greenfield, B. K. | 2004 | APMP CMR | |
| Conceptual Framework and Rationale for the Exposure and Effects Pilot Study | Hunt, J.; Davis, J. A.; Lowe, S.; Thompson, B.; Anderson, B. | 2004 | RMP | |
| Contaminant Concentrations in Sport Fish from San Francisco Bay, 2006 | Hunt, J. A.; Davis, J. A.; Greenfield, B. K.; Melwani, A. R.; Fairey, R.; Sigala, M.; Crane, D.; Regalado, K.; Bonnema, A. | 2008 | RMP | |
| Legacy and Emerging Contaminants in San Francisco Bay Sport Fish, 2003 | Hunt, J. A. | 2005 | HTML | RMP |
| Monitoring Mercury in Sport Fish from Delta Watershed | Hunt, J. A.; Davis, J. A. | 2005 | ||
| Selenium Concentrations in Surf Scooter and Greater Scaup from the San Francisco Estuary | Hunt, J. A.; Ross, J. R. M.; Davis, J. A.; Lowe, S.; Lovvom, J.; Crane, D.; Burkholder, B. | 2003 | RMP | |
| Selenium Concentrations in Surt Scoter | Hunt, J. A.; Ross, J. R. M.; Davis, J. A.; Lowe, S.; Lovvom, J.; Crane, D.; Burkholder, B. | 2006 | ||
| South Baylands Mercury Project: Developing biosentinel species to monitor changes in food-web mercury for the South Bay Salt Pond Restoration Project | Hunt, J. A.; Grenier, J. L.; Robinson, A.; Bezalel, S.; Norman, C.; Collins, J. | 2007 | WL | |
| DELTA RMP: Developing a Delta Regional Monitoring Program for Contaminants | Jabusch, T. W.; Ballard, A. | 2009 | ||
| Dissipation of penoxsulam, a new sulfonamide herbicide, in simulated rice field conditions | Jabusch, T. W.; Tjeerdema, R. S. | 2005 | CMR | |
| Microbial degradation of penoxsulam in flooded rice field soils | Jabusch, T. W.; Tjeerdema, R. S. | 2006 | HTML | CMR |
| Effects of Short-term Water Quality Impacts Due to Dredging and Disposal on Sensitive Fish Species in San Francisco Bay | Jabusch, T. W.; Melwani, A. R.; Ridolfi, K.; Connor, M. | 2008 | CMR | |
| Development of an environmental indicator system for watershed-based decision-making and tracking the outcomes of beneficial use restoration in the San Joaquin River basin | Jabusch, T. W.; Swanson, T.; Pawley, A.; Hoenicke, R. | 2008 | WS | |
| RMP Food Web Analysis; Data Report on Gut Contents of Four Fish Species | Jahn, A. | 2008 | RMP | |
| Methods for Analysis of Spatial and Temporal Patterns | Jassby, A. D. | 1996 | HTML PDF | RMP |
| Yuma Bat Protocol | Johnston, D. | 2002 | WL | |
| Mercury Effects, Sources, and Control Measures | Jones, A. B.; Slotton, D. G. | 1996 | HTML PDF | RMP |
| The Clean Estuary Partnership and the RMP: Comparing two stakeholder programs producing science in support of policy (2003 RMP Annual Meeting) | Kelly, J. M. | 2003 | PPT | RMP |
| Bay Area Base Map of Aquatic Habitats | Klatt, M.; Cayce, K.; Williams, M.; Collins, J. N. | 2009 | WL | |
| Organophosphate Flame Retardants in San Francisco Bay Biosolids and Sediments | Klosterhaus, S.; David, E. F.; Stapleton, H. M. | 2009 | RMP | |
| Characterization of Organophosphorus Chemicals in a PentaBDE Replacement Mixture and their Detection in Biosolids | Klosterhaus, S. | 2009 | RMP | |
| Emerging Problems. Progress on Identifying Contaminants of Concern | Klosterhaus, S. | 2007 | PPT | RMP |
| Characterization of the brominated chemicals in a PentaBDE replacement mixture and their detection in biosolids collected from two San Francisco Bay Area Waste water treatment plants | Klosterhaus, S.; Stapleton, H.; Konstantinov, A. | 2008 | RMP | |
| Inventory of Monitoring Programs in the San Francisco Bay and Delta | Kramer, K. S. | 1989 | AHI | |
| A Survey of User Needs for Data Relating to Environmental and Water Quality in the San Francisco Estuary | Kramer, K. S.; Phillips, J. H. | 1988 | AHI | |
| South Bay Salt Pond Restoration Project Interactive Map | Larned, K. | 2005 | HTML | WL |
| First evidence of conspecific brood parasitism in song sparrows with comments on methods sufficient to document this behavior | Latif, Q.; Grenier, J. L.; Heath, S.; Ballard, G.; Hauber, M. E. | 2006 | WL | |
| Organochlorine Pesticide Fate in San Francisco Bay | Leatherbarrow, J.; David, N.; Greenfield, B. K.; Davis, J. A.; Oram, J. J. | 2006 | RMP | |
| Contaminants at the Estuary Interface | Leatherbarrow, J.; Hoenicke, R.; McKee, L. J. | 2002 | PPT | RMP |
| Estuary Interface Pilot Study (1996 - 1999) | Leatherbarrow, J.; Hoenicke, R.; McKee, L. J. | 2002 | RMP | |
| Fate of Contaminants in Sediment of San Francisco Estuary: A Review of Literature and Data - Final Report | Leatherbarrow, J.; Ross, J. R. M.; David, N.; Yee, D. | 2005 | RMP | |
| Sediment and Contaminant Loading from the Guadalupe River: Implications for TMDLs and Mass Budget Models (presented at NorCal SETAC 2003 Conference) | Leatherbarrow, J.; McKee, L. J. | 2003 | WS | |
| Concentratons and Loads of Organic Contaminants and Mercury associated with Suspended Sediment Discharged to San Francisco Bay from the Sacramento-San Joaquin River Delta, CA | Leatherbarrow, J.; McKee, L. J.; Schoelhammer, D.; Ganju, N.; Flegal, A. R | 2005 | RMP | |
| Results of the Estuary Interface Pilot Study, 1996-1999, Final Report. (Technical Report of the Sources Pathways and Loading Work Group (SPLWG) of the San Francisco Estuary Regional Monitoring Program for Trace Substances (RMP)) | Leatherbarrow, J. E.; Hoenicke, R.; McKee, L. J. | 2002 | WS | |
| Ecology, Assemblage Structure, DIstribution, and Status of Fishes in Streams Tributary to the San Francisco Estuary, California | Leidy, R. A. | 2007 | HTML | HEP WS |
| Robert A. Leidy Fish Survey 1992-1998 Bay Area Stream Fishes | Leidy, R. A. | 1999 | HEP WS | |
| Guadalupe Watershed Model Support Tool for Regional Hg and PCBs Management | Lent, M.; Oram, J. J.; McKee, L .J. | 2009 | RMP | |
| Guadalupe Watershed Model. Phase: 1 Hydrology Model | Lent, M. A.; Oram, J. J.; McKee, L. J. | 2008 | RMP | |
| Montezuma Wetlands Monitoring Project Technical Review Team (TRT) Charter | Lipton, D.; Bonnefil, R.; Levine, J.; Collins, J. N.; Hicks, J.; Jones, P. | 2001 | WL | |
| The San Francisco Bay Water Board's Regulatory Approach and Information Needs | Looker, R. | 2008 | PPT | RMP |
| Current Regulatory Approach to Copper in San Francisco Bay: Source Control, Pollution Prevention, and Monitoring | Looker, R. | 2002 | PPT | RMP |
| San Francisco Bay Mercury Research Coordination Meeting February 23, 2005 Presentation- San Francisco Bay Mercury TMDL Regulatory Update | Looker, R. | 2005 | ||
| Sediment Quality Assessments in the San Francisco Estuary | Lowe, S.; Thompson, B. | 2008 | RMP | |
| Sampling in the Freshwater Reaches of the Lower Delta for the Sediment Quality Objectives Measures. UPDATED for CALFED meeting Oct 2008 | Lowe, S.; Salop, P.; Gehrts, K.; Anderson, B.; Phillips, B. M.; Bay, S. | 2008 | CMR | |
| Sampling in the Freshwater Reaches of the Lower Delta for Sediment Quality Objectives Measures | Lowe, S.; Salop, P.; Gehrts, K.; Andreson, B. S.; Philips, B. M.; Bay, S. | 2008 | ||
| Quality Assurance Project Plan: Investigations of Sources and Effects of Pyrethroid Pesticides in Watersheds of the San Francisco Bay Estuary | Lowe, S.; Anderson, B. | 2007 | CMR | |
| The Design Process for the Status and Trends Component | Lowe, S.; Thompson, B.; Hoenicke, R.; Leatherbarrow, J.; Smith, R. T.; Stevens, D.; Grosso, C. S.; DIWG | 2002 | PPT | RMP |
| 1999 Quality Assurance Project Plan for the Regional Monitoring Program for Trace Substances | Lowe, S.; Hoenicke, R.; Davis, J. A.; Scelfo, G. | 1999 | HTML PDF | RMP |
| Re-design Process of the San Francisco Estuary Regional Monitoring Program for Trace Substances (RMP) | Lowe, S.; Thompson, B; Hoenicke, R.; Leatherbarrow, J.; Taberski, K.; Smith, R.; Stevens, D. | 2004 | RMP | |
| Using a Spatially Balanced, Random Sampling Design to Assist Informed Management Decision | Lowe, S.; Ross, J. R. M; Grosso, C. S.; Franz, A.; Stevens, D. L. | 2005 | HTML | RMP |
| Characterizing Sediment Contamination and Potential Ecological Effects in Six Tributaries of the San Francisco Bay Estuary | Lowe, S.; Anderson, B.; Phillips, B.; Grosso, C. S.; Ross, J. R. M.; Franz, A.; Stevanovic, P.; Yee, D. | 2006 | RMP | |
| Final Project Report: Investigations of Sources and Effects of Pyrethroid Pesticides in Watersheds of the San Francisco Estuary | Lowe, S.; Anderson, B.; Phillips, B. | 2007 | CMR | |
| Sampling in the Freshwater Reaches of the Lower Delta for the Sediment Quality Objectives Measures | Lowe, S.; Salop, P.; Gehrts, K.; Anderson, B.; Phillips, B. M.; Bay, S. | 2008 | CMR | |
| RMP Sediment TIE Study 2007-2008: Using Toxicity Identification Evaluation (TIE) Methods to Investigate Causes of Sediment Toxicity to Amphipods | Lowe, S. | 2008 | RMP | |
| The Historical Geography and Biogeography of Tidal Salt Marshes (Abstract) | Malamud-Roam, K.; Malamud-Roam, F.; Collins, J. N.; Ingram, B. L.; Watson, E. | 2002 | WL | |
| Determining Economic Impacts of Aquatic Plant Management in California Waters | Mann, R.; Wittmann, M. | 2004 | APMP | |
| The Wetland Project Tracker | May, M.; Breaux, A.; Martindale, M.; Tuxen, K.; Collins, J.; Delaney, M.; Featherston, T.; Zhang, E. | 2005 | HTML | WL |
| Practical Guidebook to the Control of Invasive Aquatic and Wetland Plants of the San Francisco Bay - Delta Region | May, M.; Grosso, C. S.; Collins, J. N. | 2003 | HTML | BI |
| The Pulse of the Estuary: 2000 Update | May, M. | 2002 | PPT | RMP |
| The Pulse of the Estuary: Tracking Contamination with the Regional Monitoring Program 1993-1998 | May, M. | 2000 | RMP | |
| The Pulse of the Estuary: Monitoring and Managing Contamination in the San Francisco Estuary, 2000 Update | May, M. | 2002 | RMP | |
| Invasion by a Japanese marine microorganism in western North America | McGann, M.; Sloan, D.; Cohen, A. N. | 2000 | BI | |
| Human influences on nitrogen and phosphorus concentrations in creek and river waters of the Napa and Sonoma watersheds, northern San Francisco Bay, California | McKee, L .J.; Krottje, P. | 2005 | WS | |
| San Francisco Bay Mercury Loads: Scientific information development and management response. Harmonizing River Catchment and Estuary | McKee, L. J.; Yee, D.; Leatherbarrow, J. E.; David, N.; Gilbreath, A. N.; Mangarella, P.; Looker, R. | 2008 | Link | RMP |
| Mercury budget for stormwater conveyances in the San Francisco Bay Area: Towards achieving TMDL management goals for sediment and fish tissue. | McKee, L. J.; Mangarella, P. | 2006 | WS | |
| Characterization of mercury concentrations in suspended sediment loads in Guadalupe River and Coyote Creek, San Jose, California: Can TMDL targets be met? | McKee, L. J.; Leatherbarrow, J. | 2005 | HTML | WS |
| Sediment loads transported from the Delta: Implications for management of pollutants of concern | McKee, L. J. | 2001 | WS | |
| Determining Loads and Trends in Small Tributaries | McKee, L. J. | 2001 | WS | |
| The Challenges in Designing an Effective Regional Watershed Sampling Program | McKee, L. J. | 2001 | WS | |
| The use of the Simple Model for informing environmental science and management: Is this the right tool for your needs? (Presentation at the Bay Area Stormwater Management Agencies Association (BASMAA) modelling forum, San Francisco Regional Water Quality Control Board, Oakland, May, 2001) | McKee, L. J. | 2001 | WS | |
| Estimating sediment related contaminant loads entering San Francisco Bay from the Central Valley: A contribution to Region 2 and Region 5 TMDLs | McKee, L. J. | 2002 | WS | |
| Loadings of Particles and Contaminants to the Bay from the Central Valley | McKee, L. J. | 2002 | PPT | RMP |
| Water quality modeling: Characterization of nutrients in surface waters and modeling at the watershed scale (Guest lecture, University of California at Berkeley, Civil & Environmental Engineering CE 290C: Watersheds and Water Quality, February 21, 2002) | McKee, L. J. | 2002 | WS | |
| Measurement of sediment and contaminant loads from the Guadalupe River watershed: sampling and analysis plan | McKee, L. J. | 2002 | WS | |
| Estimation of Total Mercury Fluxes Entering San Francisco Bay from the Sacramento and San Joaquin River Watersheds (Technical Memo) | McKee, L. J.; Foe, C. | 2002 | WS | |
| Estimates of suspended-sediment flux entering San Francisco Bay from the Sacramento and San Joaquin Delta | McKee, L. J.; Ganju, N.; Schoellhamer, D.; Davis, J. A.; Yee, D.; Leatherbarrow, J.; Hoenicke, R. | 2002 | RMP | |
| Urban Runoff Literature Review (TMDL Presentation) | McKee, L. J.; Leatherbarrow, J.; Newland, S.; Davis, J. A. | 2002 | RMP | |
| Regional Watershed Program (PowerPoint presentation presented to the SFEI Board of Directors on 3/28/03) | McKee, L. J. | 2003 | WS | |
| A Watershed Year for RMP & CEP: Sources Pathways & Loadings 2002/2003 | McKee, L. J.; Leatherbarrow, J. | 2003 | PPT | RMP |
| A review of urban runoff processes in the Bay Area: Existing knowledge, conceptual models, and monitoring recommendations | McKee, L. J.; Leatherbarrow, J.; Newland, S.; Davis, J. A. | 2003 | RMP | |
| The concentration and load of PCBs, OC pesticides, and mercury associated with suspended sediments in the lower Guadalupe River, San Jose, California. A Technical Report of the Regional Watershed Program | McKee, L. J.; Leatherbarrow, J.; Eads, R.; Freeman, L. | 2004 | WS | |
| Sources, Pathways, and Loadings: 5-Year Work Plan (2005-2009) | McKee, L. J. | 2005 | RMP | |
| Mercury and methylmercury loads entering San Francisco Bay from the historic New Almaden mercury mines | McKee, L. J.; Leatherbarrow, J. | 2005 | HTML | WS |
| Concentrations and loads of mercury, PCBs, and OC pesticides in the lower Guadalupe River, San Jose, California: Water Years 2003 and 2004 | McKee, L. J.; Leatherbarrow, J.; Oram, J. J. | 2005 | WS | |
| Estimates of suspended sediment entering San Francisco Bay from the Sacramento and San Joaquin Delta, San Francisco Bay, California | McKee, L. J.; Ganju, N.; Schoellhamer, D. | 2006 | RMP | |
| Concentrations and Loads of Mercury, PCBs and PBDEs in the Lower Guadalupe River, San Jose, California: Water Years 2003, 2004, and 2005. | McKee, L. J.; Oram, J. J.; Leatherbarrow, J.; Bonnema, A.; Heim, W.; Stephenson, M. | 2006 | WS | |
| Alameda Creek Sediment Forum | McKee, L. J.; Gilbreath, A. N.; Pearce, S.; Bigelow, P.; Collins, J.; Ridolfi, K. | 2008 | HTML | WS |
| Advances in Understanding of Loads of Mercury and Other Pollutants to the Bay | McKee, L. J. | 2008 | PPT | RMP |
| Patterns in mercury and trace organic contamination of sport fish and sediments in San Francisco Bay compared to the offshore coast | Melwani, A.; Greenfield, B; Targgart, L.; Kellogg, M. | 2009 | RMP | |
| Spatial trends and impairment assessment of mercury in sport fish in the Sacramento-San Joaquin Delta Watershed | Melwani, A. R.; Bezalel, S. N.; Hunt, J. A.; Grenier, J. L.; Ichikawa, G.; Heim, W.; Bonnema, A.; Foe, C.; Slotton, D. G.; Davis, J. A. | 2009 | CMR | |
| California Bay-Delta Authority Fish Mercury Project, Year 2 (2006) Annual Report. Sport Fish Sampling and Analysis | Melwani, A. R.; Bezalel, S.; Hunt, J. A.; Grenier, J. L.; Hunt, J. A.; Robinson, A. H; Davis, J. | 2007 | CMR | |
| The Relationship between Landscape Features and Sport Fish Mercury in the Sacramento-San Joaquin Delta Watershed | Melwani, A. R.; Bezalel, S. N.; Grenier, L. G.; Hunt, J. A.; Robinson, A. H.; Davis, J. A. | 2007 | CMR | |
| The Influence of Chemical and Physical Factors on Macrobenthos in the San Francisco Estuary | Melwani, A. R.; Thompson, B. | 2008 | RMP | |
| Power Analysis and Optimization of the RMP Status and Trends Program | Melwani, A. R.; Greenfield, B. K.; Jahn, A.; Oram, J. J.; Sedlak, M.; Davis, J. A. | 2008 | RMP | |
| The 1998 Puget Sound Expedition: a rapid assessment survey for nonindigenous species in the shallow waters of Puget Sound | Mills, C. E.; Cohen, A. N.; Berry, H.; Wonham, M.; Bingham, B.; Bookheim, B.; Carlton, J. T.; Chapman, J. W.; Cordell, J. R.; Harris, L. H.; Klinger, T.; Kohn, A.; Lambert, C. C.; Lambert, G.; Li, K.; Secord, D.; Toft, J. | 1999 | BI | |
| Baylands Ecosystem Habitat Goals | Monroe, M.; Olofson, P. R.; Collins, J. N.; Grossinger, R. M.; Haltiner, J.; Wilcox, C. | 1999 | WL | |
| Montezuma Wetlands Monitoring Project Technical Review Team (TRT) "Kickoff" Meeting Minutes | Montezuma TRT | 2002 | WL | |
| San Francisco Bay, CA: Comprehensive ecosystem evaluation needed to discern causes of chlorophyll a increases | NOAA | 2007 | RMP | |
| Report of Science Advisors: Solano County Natural Community Conservation Plan Habitat Conservation Plan | Noss, R.; Amundson, R.; Arnold, D.; Bradbury, M.; Collinge, S.; Grewell, B.; Grosberg, R.; McKee, L. J.; Northern, P.; Swanson, C.; Yoshiyama, R.; DiGennaro, B.; Russell, V. | 2002 | WS | |
| Evaluation of Turbidity and Turbidity Related Effects on the Biota of the San Francisco Bay-Delta Estuary | O'Connor, J. M. | 1991 | AHI | |
| Episodic Ambient Water Toxicity in the San Francisco Estuary | Ogle, S.; Gunther, A.; Salop, P.; Bell, D.; Cotsifas, J.; Gold, J. | 2002 | PPT | RMP |
| San Francisco Bay Episodic Toxicity Report: 1999 Progress Report | Ogle, S. R.; Gunther, A. J. | 2000 | HTML PDF | RMP |
| Episodic Toxicity in the San Francisco Bay System - 2000 | Ogle, S. R.; Gunther, A.; Salop, P.; Bell, D.; Cotsifas, J.; Gold, J. | 2000 | RMP | |
| San Francisco Bay Episodic Toxicity Report - 2000 | Ogle, S. R.; Gunther, A. J.; Salop, P.; Bell, D.; Cotsifas, J.; Gold, J. | 2001 | RMP | |
| Episodic Toxicity in the San Francisco Bay System - 1999 | Ogle, S. R.; Gunther, A. | 1999 | HTML PDF | RMP |
| A Mass Budget of Polybrominated Diphenyl Ethers in San Francisco Bay, CA. | Oram, J. J.; McKee, L. J.; Werme, C.; Connor, M. S.; Oros, D.; Rodigari, F.; Grace, R. | 2008 | RMP | |
| Cool New Tools for Accessing RMP Data | Oram, J. J. | 2008 | RMP | |
| Improved forecasting for PCBs in San Francisco Bay. | Oram, J. J.; Davis, J. A. | 2007 | PPT | RMP |
| Dredging Impacts on Food-Web Bioaccumulation of DDTs in San Francisco Bay, CA | Oram, J. J.; Melwani, A. R. | 2006 | RMP | |
| Workshop Report: The Effects of Polycyclic Aromatic Hydrocarbons (PAH) in San Francisco Bay Sediments | Oros, D.; Connor, M. | 2006 | RMP | |
| Pyrethroid Insecticides: An Analysis of Use Patterns, Distributions, Potential Toxicity and Fate in the Sacramento-San Joaquin Delta and Central Valley | Oros, D.; Werner, I. | 2005 | CMR | |
| Polycyclic aromatic hydrocarbon (PAH) contamination in San Francisco Bay: A 10-year retrospective of monitoring in an urbanized estuary | Oros, D. R.; Ross, J. R. M.; Spies, R. M.; Mumley, T. | 2006 | RMP | |
| Levels and Distribution of Polybrominated Diphenyl Ethers in Water, Surface Sediments, and Bivalves from the San Francisco Estuary | Oros, D. R.; Hoover, D.; Rodigari, F.; Crane, D.; Sericano, J. | 2005 | Link | RMP |
| Polycyclic aromatic hydrocarbons in San Francisco Estuary sediments | Oros, D. R.; Ross, J. R. M. | 2004 | RMP | |
| Identification and evaluation of previously unknown organic contaminants in the San Francisco Estuary (1999-2001) | Oros, D. R. | 2003 | RMP | |
| Surveillance for Previously Unmonitored Organic Contaminants in the San Francisco Estuary (Poster) | Oros, D. R. | 2003 | CMR | |
| Identification and evaluation of unidentified organic contaminants in the San Francisco Estuary | Oros, D. R.; David, N. | 2002 | RMP | |
| Surveillance for previously unmonitored organic contaminants in the San Francisco Estuary | Oros, D. R.; Jarman, W. M.; Lowe, T.; David, N.; Lowe, S.; Davis, J. A. | 2003 | Link | RMP |
| Pyrethroids Workshop: Facing Up to the Challenges in Pyrethroids Methods Development and Field Monitoring | PRISM -Sediment Contamination & Toxicity Study, the PRISM-Methods Development Study, the RMP - Episodic Toxicity program, and SFEI in general. | 2006 | HTML | RMP |
| Red-Legged Frog Protocol | Padgett-Flohr, G. E.; Jennings, M. R. | 2002 | WL | |
| Cyanobacterial Populations in San Francisco Bay | Palenik, B.; Flegal, R. A. | 1999 | HTML PDF | RMP |
| A Sediment Budget for Two Reaches of Alameda Creek: support for flood control channel management | Pearce, S.; Bigelow, P.; McKee, L .J.; Gilbreath, A. | 2009 | WS | |
| Pinole Creek Sediment Source Assessment: Pavon Creeks Sub-basin | Pearce, S.; McKee, L. J.; Shonkoff, S. | 2006 | PDF PDF | WS |
| Pinole Creek Watershed Sediment Source Assessment. A technical report of the Regional Watershed Program, San Francisco Estuary Institute (SFEI), Oakland, California. (appendix only) | Pearce, S.; McKee, L. J.; Shonkoff, S. B. | 2005 | WS | |
| Pinole Creek Watershed Sediment Source Assessment. A technical report of the Regional Watershed Program, San Francisco Estuary Institute (SFEI), Oakland, California. (plotter-sized landslide map only) | Pearce, S.; McKee, L. J.; Shonkoff, S. B. | 2005 | WS | |
| Napa River Sediment TMDL Baseline Study: Geomorphic Processes and Habitat form and function in Soda Creek | Pearce, S.; O'Connor, M.; Grossinger, R. M.; McKee, L. J. | 2002 | WS | |
| Contrasting Fluvial Geometric Proceses and Historic Change Through Time: Supporting Watershed Management in Tributaries of the Napa River Watershed (poster) | Pearce, S.; Grossinger, R. M.; O'Connor, M.; McKee, L. J. | 2003 | WS | |
| Channel Geomorphology Assessment: A component of the watershed management plan for the Carneros Creek watershed, Napa County, California | Pearce, S.; O' Connor, M.; McKee, L. J.; Jones, B. | 2003 | WS | |
| Geomorphic Processes and Salmonid Habitat in Sulphur and Carneros Creeks, Napa River Watershed, Napa County California (PowerPoint presentation) | Pearce, S.; O'Connor, M.; McKee, L. J.; Jones, B. | 2003 | WS | |
| Channel Geomorphology Assessment: A component of the watershed management plan for the Sulphur Creek watershed, Napa County, California | Pearce, S.; O'Connor, M.; McKee, L. J.; Jones, B. | 2003 | WS | |
| Analysis of Reference Tidal Channel Plan Form for the Montezuma Wetlands Restoration Project | Pearce, S.; Collins, J. N. | 2004 | WL | |
| Relative effects of fluvial processes and historical land use on channel morphology in three sub-basins, Napa River basin, California, USA | Pearce, S.; Grossinger, R. M. | 2004 | WS HEP | |
| Fluvial Geomorphology, Hydrology, and Riparian Habitat of La Honda Creek Along the Hwy 84 Transportation Corridor, San Mateo County, California | Pearce, S.; McKee, L. J.; Striplen. C. J. | 2004 | HTML | WS |
| San Pedro Creek Watershed Sediment Source Analysis, Volume III: Tributary sediment source assessment | Pearce, S.; McKee, L. J.; Shonkoff, S. B. | 2004 | WS | |
| Pinole Creek Watershed Sediment Source Assessment: A sediment budget approach highlighting watershed-scale sediment-related processes and supply to the Bay | Pearce, S.; McKee, L. J.; Arnold, C.; Hokholt, L. | 2005 | HTML | WS |
| Pinole Creek Watershed Sediment Source Assessment. A technical report of the Regional Watershed Program, San Francisco Estuary Institute (SFEI), Oakland, California. (report only -- no appendix) | Pearce, S.; McKee, L. J.; Shonkoff, S. B. | 2005 | WS | |
| Stream Inventory Report for La Honda Creek: Prepared for the Midpeninsula Regional Open Space District | Pearce, S.; Gilbreath, A. N.; McKee, L. J. | 2007 | WS | |
| Trends in Suspended Sediment Input to the San Francisco Bay for Local Tributaries Watersheds | Philip Williams and Associates, Ltd. | 2005 | WS | |
| Causes of Sediment Toxicity to Mytilus galloprovincialis in San Francisco Bay, California (link to abstract of article published in Archives of Environmental Contamination and Toxicology) | Phillips, B.; Anderson, B.; Hoenicke, R.; Hunt, J.; Lowe, S.; Phillips, B.; Thompson, B.; Tjeerdema, R. | 2003 | Link | CMR |
| Investigations of Sediment Elutriate Toxicity at Three Estuarine Stations in San Francisco Bay, California | Phillips, B. M.; Anderson, B. S.; Hunt, J. W. | 2000 | RMP | |
| Causes of Sediment Toxicity to Mytilus galloprovincialis in San Francisco Bay, California | Phillips, B. M.; Anderson, B. S.; Hunt, J. W.; Thompson, B.; Lowe, S.; Hoenicke, R.; Tjeerdema, R. | 2003 | Link | RMP |
| Monitoring of Toxic Contaminants in the San Francisco Bay-Delta: A Critical Review, Emphasizing Spatial and Temporal Trend Monitoring | Phillips, D. J. H. | 1988 | AHI | |
| Toxic Contaminants in the San Francisco Bay-Delta and their Possible Biological Effects | Phillips, D. J. H. | 1987 | AHI | |
| Hg L 3 XANES study of mercury methylation in shredded Eichhornia crassipes | Rajan, M.; Darrow, J.; Hua, M.; Barnett, B.; Mendoza, M.; Greenfield, B. K.; Andrews, J. C. | 2008 | CMR APMP | |
| Calibration and evaluation of five indicators of benthic community condition in two California bay and estuary habitats | Ranasinghe, J. A.; Weisberg, S. B.; Smith, R. W.; Montagne, D. E.; Thompson, B.; Oakden, J. M.; Huff, D. D.; Cadien, D. B.; Velarde, R.G.; Ritter, K. J. | 2009 | Link PDF | CMR |
| Evaluation of Benthic Assessment Methodology in Southern California Bays and San Francisco Bay | Ranasinghe, J. A.; Thompson, B.; Smith, R.; Lowe, S. | 2004 | CMR | |
| Critical Coastal Areas Program, Phase I Final Report | Ridolfi, K.; Hoenicke, R.; Van Velsor, K. | 2007 | HTML PDF | WS |
| Appendix 1: All Deliverables Submitted for the Critical Coastal Areas Program, Phase I | Ridolfi, K. | 2007 | HTML PDF | WS |
| South Baylands Mercury Project: Assessing Differences in Food-web Mercury Associated with Restoring Salt Ponds to Tidal Marsh in South San Francisco Bay | Robinson, A.; Grenier, J .L.; DiPasquale, M.M.; Drury, D.; Melwani, A.; Bezalel, S.; Hunt, J.; Collins, J. N | 2009 | WL | |
| Toxic Potential of PAHs in San Francisco Estuary Sediments | Ross, J. R. M.; Oros, D. R. | 2006 | RMP | |
| Polycyclic aromatic hydrocarbons in the San Francisco Estuary water column: Sources, spatial distributions, and temporal trends (1993-2001) | Ross, J. R. M.; Oros, D. | 2004 | Link | RMP |
| Time Series of Suspended Solids Concentration, Salinity, Temperature, and Total Mercury Concentration in San Francsico Bay During Water Year 1998 | Ruhl, C. A.; Schoelhamer, D. H. | 1998 | RMP | |
| RMP Benthic Assessment Workshop | SFEI and the RMP | 2006 | HTML | RMP |
| The Historical Ecology of Miller Creek | Salomon, M.; Collins, J. N.; Grossinger, R. M.; Striplen. C. J.; Brewster, E. | 2008 | Link | |
| A Workshop on Toxicity Identification Evaluation (TIE's) in the San Francisco Bay Region: Lessons Learned | San Francisco Bay-Delta Aquatic Habitat Institute | 1993 | AHI | |
| Status And Trends Report On Pollutants In The San Francisco Estuary | San Francisco Bay-Delta Aquatic Habitat Institute | 1991 | AHI | |
| RMP 2007 Annual Monitoring Results | San Francisco Estuary Institute | 2009 | RMP | |
| Pulse of the Estuary: Monitoring and Managing Water Quality in the San Francisco Estuary | San Francisco Estuary Institute | 2008 | HTML PDF | RMP |
| Review of methods to reduce urban stormwater loads | San Francisco Estuary Institute; GeoSyntec | 2006 | HTML | WS |
| San Francisco Environmental Indicators Workshop (January 26, 2005): Summary Report | San Francisco Estuary Institute | 2005 | CMR | |
| San Francisco Bay Mercury News - an electronic newsletter of mercury research in the Bay Area | San Francisco Estuary Institute | 2005 | HTML | RMP |
| Policy Statement on Requests for Collaborative Work - Regional Monitoring Program | San Francisco Estuary Institute | 2000 | HTML | RMP |
| 1998 Pulse of the Estuary | San Francisco Estuary Institute | 2000 | PDF HTML | RMP |
| RMP News - Newsletter of the Regional Monitoring Program | San Francisco Estuary Institute | 2004 | HTML | RMP |
| 2004 Pulse of the Estuary | San Francisco Estuary Institute | 2004 | HTML | RMP |
| 2004 Annual Meeting Presentations of the Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 2004 | HTML | RMP |
| 2002 Annual Results | San Francisco Estuary Institute | 2004 | HTML | RMP |
| Field Evaluations of Alternative Pest Control Methods in California Waters | San Francisco Estuary Institute; Blankinship and Associates; Marin Municipal Water District; Reclamation District 999; Contra Costa County Public Works Department | 2004 | APMP | |
| Pulse of the Estuary 2005: Monitoring and Managing Water Quality in the San Francisco Estuary | San Francisco Estuary Institute | 2005 | RMP | |
| 2003 Annual Results: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 2005 | HTML | RMP |
| 1993 Annual Report: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 1994 | RMP | |
| 1994 Executive Summary: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 1996 | RMP | |
| 1994 Annual Report: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 1996 | RMP | |
| 1995 Executive Summary: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 1997 | RMP | |
| 1995 Annual Report: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 1997 | RMP | |
| Bay Area Watersheds Science Approach | San Francisco Estuary Institute | 1998 | WS | |
| RMP Objectives-Revised April 15, 1998 | San Francisco Estuary Institute | 1998 | HTML | RMP |
| Management Questions Guiding the RMP for Trace Substances - First Edition, 1998 | San Francisco Estuary Institute | 1998 | HTML | RMP |
| 1996 Executive Summary: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 1998 | RMP | |
| 1996 Annual Report: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 1998 | RMP | |
| EcoAtlas Baylands Maps | San Francisco Estuary Institute | 1998 | HTML | HEP WL |
| RMP Re-design Extended Schedule | San Francisco Estuary Institute | 2001 | HTML | RMP |
| Monitoring the US West Coast: An Assessment of Californias Estuaries and the Pacific Ocean: Year 2002 Wetlands Assessment | San Francisco Estuary Institute | 2001 | WL | |
| 1999 Annual Results: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 2001 | HTML PDF | RMP |
| The Pulse of the Estuary: Monitoring and Managing Contamination in the San Francisco Estuary 1993-1999 | San Francisco Estuary Institute | 2001 | RMP | |
| South Bay Trace Organic in Effluent Study Report | San Francisco Estuary Institute | 2001 | CMR | |
| 1999 Pulse of the Estuary | San Francisco Estuary Institute | 2001 | RMP | |
| Wetlands Work at SFEI | San Francisco Estuary Institute | 2001 | PPT | WL |
| Introduction to Wetland Monitoring Protocols | San Francisco Estuary Institute | 2001 | WL | |
| Wildcat Watershed Study | San Francisco Estuary Institute | 2001 | HTML | |
| Regional Monitoring of Water Quality in San Francisco Bay: Lessons Learned After Ten Years | San Francisco Estuary Institute | 2002 | PPT | RMP |
| Sources, Pathways and Loadings Documents | San Francisco Estuary Institute | 2002 | HTML | WS |
| Process and Products for RMP Redesign Implementation by January 2002 | San Francisco Estuary Institute | 2002 | HTML | RMP |
| 2000 Annual Results: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 2002 | HTML | RMP |
| 2000 Pulse of the Estuary | San Francisco Estuary Institute | 2002 | RMP | |
| Development of the Wetlands Regional Monitoring Program for the San Francisco Estuary | San Francisco Estuary Institute | 2002 | WL | |
| 2001 Annual Results: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 2003 | HTML | RMP |
| The Pulse of the Estuary: Monitoring and Managing Contamination in the San Francisco Estuary 1993-2001 | San Francisco Estuary Institute | 2003 | RMP | |
| 2003 Pulse of the Estuary (Published 2003) | San Francisco Estuary Institute | 2003 | RMP | |
| 2003 Annual Meeting Presentations of the Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 2003 | HTML | RMP |
| SFEI Policy: Release of Preliminary Data from the RMP (Revised May 10, 1999) | San Francisco Estuary Institute | 1999 | HTML | RMP |
| Report of the Bioaccumulation Workshop | San Francisco Estuary Institute | 1999 | HTML PDF | RMP |
| 1997 Annual Report: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 1999 | HTML PDF | RMP |
| RMP Re-design Schedule | San Francisco Estuary Institute | 1999 | HTML | RMP |
| Report of the Pesticide Workgroup | San Francisco Estuary Institute | 1999 | HTML PDF | RMP |
| Baylands Ecosystem Habitat Goals Report | San Francisco Estuary Institute | 1999 | HTML | WL |
| Protocol for Accessing and Sampling Archived Sediments from the San Francisco Estuary RMP for Trace Substances | San Francisco Estuary Institute | 2000 | HTML | RMP |
| Draft RMP Data Interpretation Policy | San Francisco Estuary Institute | 2000 | HTML | RMP |
| Final RMP Pilot/Special Study Selection Procedure (Approved October 16, 2000) | San Francisco Estuary Institute | 2000 | HTML | RMP |
| 1998 Annual Results: San Francisco Estuary Regional Monitoring Program for Trace Substances | San Francisco Estuary Institute | 2000 | HTML PDF | RMP |
| San Francisco Bay Mercury Research Coordination Meeting February 23, 2005 Presentation- A Pilot Program for Monitoring, Stakeholder Involvement, and Risk Communication in the Bay-Delta Watershed (aka Fish Mercury Project ) | San Francisco Estuary Institute; Moss Landing Marine Lab; UC Davis; DHS/EHIB; OEHHA | 2005 | ||
| The 2004 to 2005 RMP Annual Monitoring Results | San Francisco Estuary Institute | 2006 | RMP | |
| 2006 RMP Annual Monitoring Results | San Francisco Estuary Institute | 2007 | RMP | |
| California Rapid Assessment Method (CRAM) Fact Sheet, Level 2, State version | San Francisco Estuary Institute | 2008 | WL | |
| Wetland Tracker Factsheet, Bay Area, Level 1: Landscpae Assessment | San Francisco Estuary Institute | 2008 | WL | |
| The Pulse of the Estuary: Monitoring and Managing Water Quality in the San Francisco Bay | San Francisco Estuary Institute (SFEI) | 2009 | RMP | |
| Field Evaluations of Alternative Pest Control Methods in California Waters | San Francisco Estuary Institute (SFEI); Blankinship and Associates; Marin Municipal Water District; Reclamation District 999; and Contra Costa County Public Works Department; Greenfield, B.K. | 2004 | APMP | |
| Suspended sediment and sediment-associated contaminants in San Francisco Bay | Schoelhammer, D. H.; Mumley, T. E.; leatherbarrow, J. E. | 2007 | RMP | |
| Sediment Dynamics Drive Contaminant Dynamics | Schoellhamer, D.; Shellenbarger, G.; Ganju, N.; Davis, J. A.; McKee, L. J. | 2003 | PPT | RMP |
| Time Series of Trace Element Concentrations Calculated from Time Series of Suspended Solid Concentrations and RMP Water Samples | Schoellhamer, D. H. | 1996 | HTML PDF | RMP |
| Monitoring of San Francisco Bay: Is the Whole Less than the Sum of the Parts? | Schubel, J. R. | 2003 | PPT | RMP |
| Perfluorinated Compounds in San Francisco Bay Harbor Seals | Sedlak, M.; Greig, D.; Grace, R.; Riley, P. | 2008 | RMP | |
| Perfluorinated Compounds in San Francisco Bay Harbor Seals | Sedlak, M.; Greig, D.; Grace, R.; Riley, P. | 2007 | RMP | |
| Polybrominated Diphenyl Ethers in San Francisco Estuary | Sedlak, M.; Yee, D.; Davis, J. A.; Oros, D.; Rodigari, F.; van Bergen, S.; Crane, D.; Hoover, D. | 2006 | RMP | |
| Assessment of Potential Aquatic Herbicide Impacts to California Aquatic Ecosystems. | Siemering, G.; Hayworth, J. D.; Greenfield, B. K. | 2008 | CMR APMP | |
| Technical Report for the Interagency Ecological Program (IEP) Pelagic Organism Decline (POD) Workgroup: Tier 1 Risk Assessment of California Department of Boating and Waterways Aquatic Herbicide Use in the Sacramento-San Joaquin River Delta. | Siemering, G. | 2006 | CMR | |
| Aquatics Herbicides: Overview of Usage, Fate and Transport, Potential Environmental Risk, and Future Recommendations for the Sacramento-San Joaquin Delta and Central Valley | Siemering, G.; Hayworth, J. | 2005 | CMR | |
| Aquatic Pesticides Monitoring Program Monitoring Project Final Report | Siemering, G. | 2005 | APMP | |
| Aquatic Pesticides Monitoring Program Phase 2 (2003) Monitoring Project Report | Siemering, G. | 2004 | APMP | |
| Aquatic Pesticide Monitoring Program Literature Review | Siemering, G.; David, N.; Hayworth, J.; Franz, A.; Malamud-Roam, F. | 2003 | APMP | |
| Aquatic Pesticides Monitoring Program Phase 3 (2004) Monitoring Project Report | Siemering, G.; Hayworth, J.; Melwani, A. R.; Crane, D.; Mekebri, A.; Blondina, G.; Schlenk, D.; Xie, L.; Irwin, M. A.; Berry, K.; Greenfield, B. K.; Thrippleton, K. | 2004 | APMP | |
| Asian Kelp Undaria pinnatifida in the northeastern Pacific Ocean | Silva, P.; Woodlield, R.; Cohen, A. N.; Harris, L. H.; Goddard, J. | 2002 | BI | |
| The UC Davis Biosentinel Mercury Program: Using Small Fish to Monitor Fine-scale Patterns of Methylmercury Contamination in the Watershed | Slotten, D.; Davis, J. A. | 2008 | CMR | |
| Evaluation of water hyacinth survival and growth in the Sacramento Delta, California following cutting | Spencer, D. F.; Ksander, G. G.; Donovan, M. J.; Liow, P. S.; Chan, W. K.; Greenfield, B. K.; Shonkoff, S. B.; Andrews, S. P. | 2006 | CMR APMP | |
| Alternate and New Brominated Flame Retardants Detected in US House Dust | Stapleton, H.; Allen, J; Kelly, S.; Konstantinov, A.; Klosterhaus, S.; McClean, M.; Webster, T. | 2008 | HTML PDF | RMP |
| Historical Ecology and Landscape Change of the San Gabriel River and Floodplain | Stein, E.; Dark, S.; Longcore, T.; Hall, N.; Beland, M.; Grossinger, R. M.; Casanova, J.; Sutula, M. | 2007 | HEP | |
| Estimation of Means, Totals, and Distribution Functions from Probability Survey Data | Stevens, D. | 2002 | RMP | |
| Determining the Spatial Distribution of Water and Sediment Sampling Locations | Stevens, D. | 2002 | PPT | RMP |
| Old Science, New Science: Incorporating Traditional Ecological Knowledge into Contemporary Management | Striplen, C. J.; DeWeerdt, S. | 2002 | HEP | |
| Wetland Habitat Changes in the Rodeo Lagoon Watershed, Golden Gate National Recreation Area, Marin County, CA | Striplen. C. J.; Grossinger, R. M.; Collins, J. N. | 2004 | HEP WL | |
| QAPP for environmental monitoring and assessment program West Coast Pilot 2002 Intertidal Assessment: California Intensification | Sutula, M.; Collins, J. N.; Callaway, J.; Parker, T.; Vasey, M.; Wittner, E. | 2001 | WL | |
| San Francisco Bay Mercury Research Coordination Meeting February 23, 2005 Presentation- Mercury Concentrations in Fishfrom the San Francisco Bay Area | Taberski, K. | 2005 | ||
| Benefits of the Redesigned RMP to Regional Board Decision Making | Taberski, K. | 2002 | PPT | RMP |
| Environmental threats to tidal marsh vertebrates of the San Francisco Bay Estuary | Takekawa, J. Y.; Woo, I.; Spautz, H.; Nur, N.; Grenier, J. L.; Malamud-Roam, K.; Nordby, J. C.; Cohen, A. N.; Malamud-Roam, F.; Wainwright-De La Cruz, S. E. | 2006 | BI WL | |
| Copper and Nickel TMDL Development: Lower South Bay (2002 RMP Annual Meeting) | Tetra Tech. Inc. | 2002 | PPT | RMP |
| Mercury Contamination from Historic Mining in Water and Sediment, Guadalupe River and San Francisco Bay, CA | Thomas, M. A.; Conaway, C. H.; Steding, D. J.; Marvin-DiPasquale, M.; Abu-Saba, K. E.; Flegal, A. R. | 2003 | Link | RMP |
| Estimated Sediment Contaminant Concentrations Associated with Biological Impacts at San Diego Bay Cleanup Sites | Thompson, B.; Melwani, A. R.; Hunt, J. A. | 2009 | CMR | |
| Relationship Between Sediment Contamination and Toxicity in San Francisco Bay | Thompson, B.; Anderson, B.; Hunt, J.; Taberski, K.; Phillips, A. | 1998 | HTML | RMP |
| SFEI: More Than Just RMP (2002 RMP Annual Meeting) | Thompson, B. | 2002 | PPT | RMP |
| CISNet San Pablo Bay Network of Environmental Stress Indicators; Benthic Microfauna. | Thompson, B.; Lowe, S.; Ross, J. R. M. | 2003 | HTML | CMR |
| Relationship Between Sediment Toxicity and Contamination in San Francisco Bay (Abstract) | Thompson, B.; Anderson, B.; Hunt, J.; Taberski, K.; Phillips, B. | 1999 | HTML | CMR |
| An Overview of Contaminant-Related Issues Identified by Monitoring in San Francisco Bay - Abstract | Thompson, B.; Hoenicke, R.; Davis, J. A.; Gunther, A. | 1999 | HTML | RMP |
| An overview of contaminant-related issues identified by monitoring in San Francisco Bay | Thompson, B.; Hoenicke, R.; Davis, J. A.; Gunther, A. | 2000 | HTML | RMP |
| Results of the Benthic Pilot Study 1994 - 1997, Part 1 | Thompson, B.; Lowe, S.; Kellogg, M. | 2000 | RMP | |
| Development of Environmental Indicators of the Condition of San Francisco Estuary | Thompson, B.; Gunther, A. | 2004 | CMR | |
| Assessment of Macrobenthos Response to Sediment Contamination in the San Francisco Estuary (published in Environmental Toxicology and Chemistry) | Thompson, B.; Lowe, S. | 2004 | Link | CMR |
| Biological Effects of Anthropogenic Contaminants in the San Francisco Estuary | Thompson, B.; Adelsbach, T.; Brown, C.; Hunt, J.; Kuwabara, J.; Neale, J.; Ohlendorf, H.; Schwarzbach, S.; Spies, R. M.; Taberski, K. M. | 2007 | RMP | |
| Relationship Between Sediment Toxicity and Contamination in San Francisco Bay | Thompson, B.; Anderson, B.; Hunt, J.; Taberski, K.; Phillips, B. | 1997 | HTML | CMR |
| Indicators of Anthropogenic Contamination in the Estuary | Thompson, B.; Melwani, A. R.; Lowe, S.; Greenfield, B. K.; Robinson, A. | 2007 | CMR | |
| Assessment of macrobenthos resonse to sediment contamination in the San Francisco Estuary, USA | Thompson, B. E.; Lowe, S. | 2004 | CMR | |
| San Francisco Bay Atmospheric Deposition Pilot Study Part 3: Dry Deposition of PAHs and PCBs | Tsai, P.; Hoenicke, R.; Yee, D.; Baker, J. E.; Bamford, H. A. | 2005 | RMP | |
| Atmospheric Concentrations and Fluxes of Organic Compounds in the Northern San Francisco Estuary | Tsai, P.; Hoenicke, R.; Yee, D. | 2002 | HTML | RMP |
| San Francisco Bay Atmospheric Deposition Pilot Study Part 2: Trace Metals | Tsai, P.; Hoenicke, R.; Hansen, E.; Lee, K. | 2001 | RMP | |
| San Francisco Bay Atmospheric Deposition Pilot Study Part 1: Mercury | Tsai, P.; Hoenicke, R. | 2001 | HTML PDF | RMP |
| San Francisco Bay Atmospheric Deposition Pilot Study (Trace Metals): Presentation at 2001 WEFTEC | Tsai, P.; Hoenicke, R.; Hansen, E.; Lee, K.; Tucker, D. | 2001 | RMP | |
| Benefits of the RMP and Challenges for the Future (2003 RMP Annual Meeting) | Tucker, D. | 2003 | PPT | RMP |
| Tidal Marsh Vegetation | Vasey, M.; Callaway, J.V.; Parker, T. | 2002 | WL | |
| Aquatic Pesticide Monitoring Program Modeling Workgroup Final Report | Wadley, A.; Hunt, J.; Young, T.; Malamud-Roam, K.; Oros, D. | 2003 | APMP | |
| The potential distribution and abundance of zebra mussels in California | Weinstein, A.; Cohen, A. N. | 1998 | BI | |
| Biological Warfare. MetroNews (5-1-97) | Weir, C. | 1997 | HTML | BI |
| The level of agreement among experts applying best professional judgment to assess the condition of benthic infaunal communities | Weisberg, S. B.; Thompson, B.; Ranasinghe, J. A.; Montagne, D. E.; Cadien, D. B.; Dauer, D. M.; Diener, D.; Oliver, J.; Reish, D. J.; Velarde, R. G.; Word, J. Q. | 2008 | CMR RMP | |
| Shifting Baselines in a California Oak Savanna: Nineteenth Century Data to Inform Restoration Scenarios. | Whipple, A. A.; Grossinger, R. M.; Davis, F. W. | In Press | HEP | |
| Developing Water Quality Solutions for San Francisco Bay | Whyte, D. | 2003 | PPT | RMP |
| WRMP Factsheet Wetland and Riparian Base Map | Williams, M.; Cayce, K. | 2009 | WL | |
| Mapping Urbanized and Rural Drainages in the Bay Area: A Tool for Improved Management of Stormwater Contaminants Derived from Small Tributaries | Wittner, E.; McKee, L. J. | 2002 | WS | |
| The National Hydrography Data Set: San Francisco Bay Area | Wittner, E.; McKee, L. J. | 2002 | WS | |
| Quantitative Determination of Pyrethroids, Pyrethrins, and Piperonyl Butoxide in Surface Water by High Resolution Gas Chromatography/High Resolution Mass Spectrometry | Woudneh, M.; Oros, D. R. | 2006 | CMR | |
| Pyrethroids, Pyrethrins, and Piperonyl Butoxide in Sediments by High Resolution Gas Chromatography/High Resolution Mass Spectrometry | Woudneh, M.; Oros, D. R. | 2006 | CMR | |
| A Legacy of Contaminants in SF Bay and Wetland Cores | Yee, D.; Hammond, D.; Heim, W.; Rattonetti, T.; van Bergen, S. | 2009 | RMP | |
| A First-Order Mass Budget for Methylmercury in San Francisco Bay, CA. | Yee, D.; McKee, L. J .; Oram, J. J. | 2008 | ||
| A Methylmercury Budget for San Francisco Bay | Yee, D. | 2008 | PPT | RMP |
| Synthesis of long-term nickel monitoring in San Francisco Bay | Yee, D.; Grieb, T.; Mills, W.; Sedlak, M. | 2007 | RMP | |
| South Bay/Fairfield-Suisun Trace Organic Contaminants in Effluent Study | Yee, D.; Leatherbarrow, J.; Davis, J. A.; Prepared for the San Jose/Santa Clara Water Pollution Control Plant, Sunnyvale Water Pollution Control Plant, Palo Alto Water Quality Control Plant, and Fairfield-Suisun Sewer District | 2001 | CMR | |
| Organic Contaminant Concentrations in Bay Area Effluents | Yee, D.; Leatherbarrow, J.; Davis, J. A. | 2002 | PPT | RMP |
| Aquatic Pesticides Monitoring Program Quality Assurance Program Plan | Yee, D.; Siemering, G.; Hayworth, J.; Oros, D. R.; Lowe, S.; Davis, J. A. | 2004 | APMP | |
| Methylmercury in San Francisco Bay Surface Sediments | Yee, D. | 2005 | HTML | RMP |
| Castro Valley Atmospheric Deposition Study | Yee, D.; Franz, A. | 2005 | CMR | |
| San Francisco Bay Mercury Research Coordination Meeting February 23, 2005 Presentation- Meeting Agenda | to come | 2005 | ||
| San Francisco Bay Mercury Research Coordination Meeting February 23, 2005 Presentation- Introduction to the QA Program for Mercury Studies | van Buuren, B. | 2005 | ||
| Further Development of Chronic Ampelisca abdita Bioassay as an Indicator of Sediment Toxicity | wWeston, D. P. | 1996 | HTML PDF | RMP |
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